Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 SPTSSB-204ENST00000617024 1292 ntBASIC14.47□□□□□ -0.09
TFF3Q07654 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.47□□□□□ -0.09
TFF3Q07654 AC004840.1-201ENST00000636359 365 ntBASIC14.47□□□□□ -0.09
TFF3Q07654 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TFF3Q07654 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TFF3Q07654 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TFF3Q07654 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TFF3Q07654 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TFF3Q07654 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TFF3Q07654 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TFF3Q07654 NKILA-202ENST00000614771 2598 ntBASIC14.47□□□□□ -0.09
TFF3Q07654 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TFF3Q07654 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.47□□□□□ -0.09
TFF3Q07654 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TFF3Q07654 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TFF3Q07654 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TFF3Q07654 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.47□□□□□ -0.09
TFF3Q07654 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TFF3Q07654 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TFF3Q07654 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TFF3Q07654 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TFF3Q07654 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
TFF3Q07654 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TFF3Q07654 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.46□□□□□ -0.09
TFF3Q07654 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TFF3Q07654 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TFF3Q07654 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.46□□□□□ -0.09
TFF3Q07654 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
TFF3Q07654 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TFF3Q07654 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.46□□□□□ -0.09
TFF3Q07654 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TFF3Q07654 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TFF3Q07654 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.46□□□□□ -0.09
TFF3Q07654 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TFF3Q07654 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.46□□□□□ -0.09
TFF3Q07654 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TFF3Q07654 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.46□□□□□ -0.09
TFF3Q07654 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.46□□□□□ -0.09
TFF3Q07654 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TFF3Q07654 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.46□□□□□ -0.09
TFF3Q07654 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TFF3Q07654 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.46□□□□□ -0.09
TFF3Q07654 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.46□□□□□ -0.09
TFF3Q07654 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.46□□□□□ -0.09
TFF3Q07654 AL589739.1-201ENST00000607720 493 ntBASIC14.46□□□□□ -0.09
TFF3Q07654 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
TFF3Q07654 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TFF3Q07654 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
TFF3Q07654 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TFF3Q07654 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.46□□□□□ -0.09
TFF3Q07654 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TFF3Q07654 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.46□□□□□ -0.1
TFF3Q07654 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.46□□□□□ -0.1
TFF3Q07654 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TFF3Q07654 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TFF3Q07654 AC011676.5-201ENST00000624864 2660 ntBASIC14.46□□□□□ -0.1
TFF3Q07654 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.46□□□□□ -0.1
TFF3Q07654 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.46□□□□□ -0.1
TFF3Q07654 AP001094.4-201ENST00000579008 2176 ntBASIC14.46□□□□□ -0.1
TFF3Q07654 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TFF3Q07654 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TFF3Q07654 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TFF3Q07654 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TFF3Q07654 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TFF3Q07654 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TFF3Q07654 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TFF3Q07654 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TFF3Q07654 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TFF3Q07654 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TFF3Q07654 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TFF3Q07654 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TFF3Q07654 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.45□□□□□ -0.1
TFF3Q07654 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TFF3Q07654 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TFF3Q07654 AC007541.1-201ENST00000570282 1469 ntBASIC14.45□□□□□ -0.1
TFF3Q07654 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TFF3Q07654 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.45□□□□□ -0.1
TFF3Q07654 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TFF3Q07654 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TFF3Q07654 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TFF3Q07654 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.45□□□□□ -0.1
TFF3Q07654 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.45□□□□□ -0.1
TFF3Q07654 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.45□□□□□ -0.1
TFF3Q07654 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TFF3Q07654 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.45□□□□□ -0.1
TFF3Q07654 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TFF3Q07654 HLA-V-201ENST00000429037 534 ntBASIC14.45□□□□□ -0.1
TFF3Q07654 AL353779.1-201ENST00000434793 351 ntBASIC14.45□□□□□ -0.1
TFF3Q07654 ZNF890P-202ENST00000530367 1156 ntBASIC14.45□□□□□ -0.1
TFF3Q07654 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.45□□□□□ -0.1
TFF3Q07654 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
TFF3Q07654 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.45□□□□□ -0.1
TFF3Q07654 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.45□□□□□ -0.1
TFF3Q07654 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.45□□□□□ -0.1
TFF3Q07654 AC140912.1-201ENST00000577171 1054 ntBASIC14.45□□□□□ -0.1
TFF3Q07654 AL133215.2-201ENST00000609242 977 ntBASIC14.45□□□□□ -0.1
TFF3Q07654 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.45□□□□□ -0.1
TFF3Q07654 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.45□□□□□ -0.1
TFF3Q07654 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TFF3Q07654 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms