Protein–RNA interactions for Protein: P84022

SMAD3, Mothers against decapentaplegic homolog 3, humanhuman

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3P84022 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD3P84022 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD3P84022 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD3P84022 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD3P84022 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.66■□□□□ 0.42
SMAD3P84022 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.66■□□□□ 0.42
SMAD3P84022 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.66■□□□□ 0.42
SMAD3P84022 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.66■□□□□ 0.42
SMAD3P84022 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.66■□□□□ 0.42
SMAD3P84022 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD3P84022 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD3P84022 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD3P84022 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.66■□□□□ 0.42
SMAD3P84022 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD3P84022 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SMAD3P84022 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.66■□□□□ 0.42
SMAD3P84022 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.66■□□□□ 0.42
SMAD3P84022 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.66■□□□□ 0.42
SMAD3P84022 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.66■□□□□ 0.42
SMAD3P84022 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.66■□□□□ 0.42
SMAD3P84022 MIR6069-201ENST00000620069 79 ntBASIC17.66■□□□□ 0.42
SMAD3P84022 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.66■□□□□ 0.42
SMAD3P84022 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SMAD3P84022 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.66■□□□□ 0.42
SMAD3P84022 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.66■□□□□ 0.42
SMAD3P84022 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD3P84022 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD3P84022 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD3P84022 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.66■□□□□ 0.42
SMAD3P84022 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
SMAD3P84022 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD3P84022 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD3P84022 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.66■□□□□ 0.42
SMAD3P84022 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD3P84022 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD3P84022 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SMAD3P84022 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.65■□□□□ 0.42
SMAD3P84022 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD3P84022 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD3P84022 CLK3P2-201ENST00000427566 1453 ntBASIC17.65■□□□□ 0.42
SMAD3P84022 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.65■□□□□ 0.42
SMAD3P84022 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD3P84022 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD3P84022 SLC25A1P3-201ENST00000395415 828 ntBASIC17.65■□□□□ 0.42
SMAD3P84022 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD3P84022 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC17.65■□□□□ 0.42
SMAD3P84022 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.65■□□□□ 0.42
SMAD3P84022 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD3P84022 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD3P84022 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD3P84022 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.65■□□□□ 0.42
SMAD3P84022 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.65■□□□□ 0.42
SMAD3P84022 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD3P84022 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
SMAD3P84022 FOS-206ENST00000555347 1280 ntTSL 2 BASIC17.65■□□□□ 0.42
SMAD3P84022 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.65■□□□□ 0.42
SMAD3P84022 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.65■□□□□ 0.42
SMAD3P84022 AL022328.1-201ENST00000610050 478 ntBASIC17.65■□□□□ 0.42
SMAD3P84022 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.65■□□□□ 0.42
SMAD3P84022 MIR6727-201ENST00000620702 65 ntBASIC17.65■□□□□ 0.42
SMAD3P84022 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD3P84022 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD3P84022 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD3P84022 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD3P84022 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD3P84022 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD3P84022 AC006538.1-201ENST00000567905 1585 ntBASIC17.65■□□□□ 0.42
SMAD3P84022 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.65■□□□□ 0.42
SMAD3P84022 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
SMAD3P84022 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SMAD3P84022 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD3P84022 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD3P84022 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD3P84022 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD3P84022 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD3P84022 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD3P84022 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.65■□□□□ 0.42
SMAD3P84022 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD3P84022 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.64■□□□□ 0.42
SMAD3P84022 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.64■□□□□ 0.42
SMAD3P84022 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
SMAD3P84022 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMAD3P84022 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMAD3P84022 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
SMAD3P84022 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMAD3P84022 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SMAD3P84022 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.64■□□□□ 0.41
SMAD3P84022 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.64■□□□□ 0.41
SMAD3P84022 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMAD3P84022 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMAD3P84022 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMAD3P84022 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.64■□□□□ 0.41
SMAD3P84022 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
SMAD3P84022 AC007551.1-201ENST00000457394 519 ntBASIC17.64■□□□□ 0.41
SMAD3P84022 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMAD3P84022 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.64■□□□□ 0.41
SMAD3P84022 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.64■□□□□ 0.41
SMAD3P84022 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMAD3P84022 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.64■□□□□ 0.41
SMAD3P84022 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms