Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H3AP68431 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HIST1H3AP68431 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.43□□□□□ -0.1
HIST1H3AP68431 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H3AP68431 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HIST1H3AP68431 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H3AP68431 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H3AP68431 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H3AP68431 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H3AP68431 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H3AP68431 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H3AP68431 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
HIST1H3AP68431 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H3AP68431 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.42□□□□□ -0.1
HIST1H3AP68431 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.42□□□□□ -0.1
HIST1H3AP68431 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H3AP68431 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.42□□□□□ -0.1
HIST1H3AP68431 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H3AP68431 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.42□□□□□ -0.1
HIST1H3AP68431 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H3AP68431 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
HIST1H3AP68431 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
HIST1H3AP68431 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H3AP68431 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H3AP68431 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H3AP68431 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.42□□□□□ -0.1
HIST1H3AP68431 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
HIST1H3AP68431 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.42□□□□□ -0.1
HIST1H3AP68431 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.42□□□□□ -0.1
HIST1H3AP68431 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
HIST1H3AP68431 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.42□□□□□ -0.1
HIST1H3AP68431 AC106730.1-201ENST00000566722 1090 ntBASIC14.42□□□□□ -0.1
HIST1H3AP68431 AC018845.2-201ENST00000568326 409 ntBASIC14.42□□□□□ -0.1
HIST1H3AP68431 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.42□□□□□ -0.1
HIST1H3AP68431 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.42□□□□□ -0.1
HIST1H3AP68431 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.42□□□□□ -0.1
HIST1H3AP68431 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.42□□□□□ -0.1
HIST1H3AP68431 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H3AP68431 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H3AP68431 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HIST1H3AP68431 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H3AP68431 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H3AP68431 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H3AP68431 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HIST1H3AP68431 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H3AP68431 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.42□□□□□ -0.1
HIST1H3AP68431 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
HIST1H3AP68431 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
HIST1H3AP68431 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HIST1H3AP68431 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.41□□□□□ -0.1
HIST1H3AP68431 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H3AP68431 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H3AP68431 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.41□□□□□ -0.1
HIST1H3AP68431 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HIST1H3AP68431 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H3AP68431 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.41□□□□□ -0.1
HIST1H3AP68431 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H3AP68431 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H3AP68431 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HIST1H3AP68431 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H3AP68431 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.41□□□□□ -0.1
HIST1H3AP68431 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.41□□□□□ -0.1
HIST1H3AP68431 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.41□□□□□ -0.1
HIST1H3AP68431 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
HIST1H3AP68431 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.41□□□□□ -0.1
HIST1H3AP68431 AC007967.2-201ENST00000432613 625 ntBASIC14.41□□□□□ -0.1
HIST1H3AP68431 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.41□□□□□ -0.1
HIST1H3AP68431 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H3AP68431 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.41□□□□□ -0.1
HIST1H3AP68431 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.41□□□□□ -0.1
HIST1H3AP68431 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
HIST1H3AP68431 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.41□□□□□ -0.1
HIST1H3AP68431 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HIST1H3AP68431 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.41□□□□□ -0.1
HIST1H3AP68431 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.41□□□□□ -0.1
HIST1H3AP68431 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.41□□□□□ -0.1
HIST1H3AP68431 ZNF259P1-201ENST00000407656 1365 ntBASIC14.41□□□□□ -0.1
HIST1H3AP68431 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H3AP68431 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.41□□□□□ -0.1
HIST1H3AP68431 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
HIST1H3AP68431 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.41□□□□□ -0.1
HIST1H3AP68431 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
HIST1H3AP68431 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H3AP68431 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H3AP68431 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H3AP68431 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H3AP68431 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HIST1H3AP68431 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H3AP68431 AC092919.2-201ENST00000623631 1645 ntBASIC14.41□□□□□ -0.1
HIST1H3AP68431 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.4□□□□□ -0.1
HIST1H3AP68431 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.4□□□□□ -0.1
HIST1H3AP68431 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H3AP68431 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H3AP68431 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H3AP68431 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H3AP68431 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H3AP68431 AC022188.1-201ENST00000620960 1664 ntBASIC14.4□□□□□ -0.1
HIST1H3AP68431 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.4□□□□□ -0.1
HIST1H3AP68431 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H3AP68431 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms