Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
WNT3AP56704 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
WNT3AP56704 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.66■□□□□ 0.26
WNT3AP56704 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
WNT3AP56704 AC099522.2-201ENST00000607001 744 ntBASIC16.66■□□□□ 0.26
WNT3AP56704 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
WNT3AP56704 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
WNT3AP56704 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
WNT3AP56704 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.66■□□□□ 0.26
WNT3AP56704 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
WNT3AP56704 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
WNT3AP56704 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
WNT3AP56704 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
WNT3AP56704 AC006449.6-201ENST00000612330 2296 ntBASIC16.66■□□□□ 0.26
WNT3AP56704 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.66■□□□□ 0.26
WNT3AP56704 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
WNT3AP56704 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.66■□□□□ 0.26
WNT3AP56704 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.66■□□□□ 0.26
WNT3AP56704 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.66■□□□□ 0.26
WNT3AP56704 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.65■□□□□ 0.26
WNT3AP56704 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
WNT3AP56704 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
WNT3AP56704 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
WNT3AP56704 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
WNT3AP56704 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.65■□□□□ 0.26
WNT3AP56704 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
WNT3AP56704 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
WNT3AP56704 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
WNT3AP56704 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
WNT3AP56704 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
WNT3AP56704 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
WNT3AP56704 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
WNT3AP56704 AL391005.1-201ENST00000623953 2435 ntBASIC16.65■□□□□ 0.26
WNT3AP56704 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
WNT3AP56704 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
WNT3AP56704 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.65■□□□□ 0.26
WNT3AP56704 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.65■□□□□ 0.26
WNT3AP56704 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.65■□□□□ 0.26
WNT3AP56704 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
WNT3AP56704 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
WNT3AP56704 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
WNT3AP56704 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.65■□□□□ 0.26
WNT3AP56704 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.65■□□□□ 0.26
WNT3AP56704 AC091812.2-201ENST00000619081 385 ntBASIC16.65■□□□□ 0.26
WNT3AP56704 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
WNT3AP56704 AC018695.7-201ENST00000624587 2492 ntBASIC16.65■□□□□ 0.26
WNT3AP56704 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
WNT3AP56704 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
WNT3AP56704 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
WNT3AP56704 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
WNT3AP56704 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
WNT3AP56704 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
WNT3AP56704 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
WNT3AP56704 AC026691.1-201ENST00000602502 2017 ntBASIC16.65■□□□□ 0.26
WNT3AP56704 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
WNT3AP56704 PMS2P7-201ENST00000506558 1336 ntBASIC16.65■□□□□ 0.26
WNT3AP56704 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
WNT3AP56704 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
WNT3AP56704 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
WNT3AP56704 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.65■□□□□ 0.26
WNT3AP56704 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
WNT3AP56704 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
WNT3AP56704 AL596087.1-201ENST00000400979 1969 ntBASIC16.64■□□□□ 0.25
WNT3AP56704 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
WNT3AP56704 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.64■□□□□ 0.25
WNT3AP56704 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
WNT3AP56704 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.64■□□□□ 0.25
WNT3AP56704 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
WNT3AP56704 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
WNT3AP56704 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
WNT3AP56704 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
WNT3AP56704 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
WNT3AP56704 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
WNT3AP56704 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
WNT3AP56704 MCCD1P2-201ENST00000423228 335 ntBASIC16.64■□□□□ 0.25
WNT3AP56704 FAM58CP-201ENST00000435741 640 ntBASIC16.64■□□□□ 0.25
WNT3AP56704 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
WNT3AP56704 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
WNT3AP56704 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.64■□□□□ 0.25
WNT3AP56704 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.64■□□□□ 0.25
WNT3AP56704 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.64■□□□□ 0.25
WNT3AP56704 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.64■□□□□ 0.25
WNT3AP56704 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
WNT3AP56704 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.64■□□□□ 0.25
WNT3AP56704 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
WNT3AP56704 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.64■□□□□ 0.25
WNT3AP56704 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
WNT3AP56704 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
WNT3AP56704 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.64■□□□□ 0.25
WNT3AP56704 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
WNT3AP56704 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
WNT3AP56704 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
WNT3AP56704 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.64■□□□□ 0.25
WNT3AP56704 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.64■□□□□ 0.25
WNT3AP56704 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
WNT3AP56704 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.64■□□□□ 0.25
WNT3AP56704 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
WNT3AP56704 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
WNT3AP56704 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.63■□□□□ 0.25
WNT3AP56704 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms