Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 AL589702.1-201ENST00000641229 1509 ntBASIC16.37■□□□□ 0.21
ZNF140P52738 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF140P52738 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF140P52738 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF140P52738 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF140P52738 BX842568.4-201ENST00000421222 227 ntBASIC16.37■□□□□ 0.21
ZNF140P52738 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.37■□□□□ 0.21
ZNF140P52738 DNAJB3-201ENST00000446806 729 ntBASIC16.37■□□□□ 0.21
ZNF140P52738 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.37■□□□□ 0.21
ZNF140P52738 KRT8P48-201ENST00000515599 1220 ntBASIC16.37■□□□□ 0.21
ZNF140P52738 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.37■□□□□ 0.21
ZNF140P52738 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.37■□□□□ 0.21
ZNF140P52738 AC243562.1-201ENST00000560672 389 ntBASIC16.37■□□□□ 0.21
ZNF140P52738 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.37■□□□□ 0.21
ZNF140P52738 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.37■□□□□ 0.21
ZNF140P52738 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.37■□□□□ 0.21
ZNF140P52738 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.37■□□□□ 0.21
ZNF140P52738 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF140P52738 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.37■□□□□ 0.21
ZNF140P52738 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
ZNF140P52738 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF140P52738 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.37■□□□□ 0.21
ZNF140P52738 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF140P52738 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF140P52738 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.37■□□□□ 0.21
ZNF140P52738 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
ZNF140P52738 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
ZNF140P52738 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.37■□□□□ 0.21
ZNF140P52738 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.37■□□□□ 0.21
ZNF140P52738 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
ZNF140P52738 OR6D1P-203ENST00000641209 4860 ntBASIC16.37■□□□□ 0.21
ZNF140P52738 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
ZNF140P52738 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
ZNF140P52738 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF140P52738 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.37■□□□□ 0.21
ZNF140P52738 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.36■□□□□ 0.21
ZNF140P52738 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.36■□□□□ 0.21
ZNF140P52738 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF140P52738 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.36■□□□□ 0.21
ZNF140P52738 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF140P52738 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF140P52738 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF140P52738 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF140P52738 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF140P52738 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.36■□□□□ 0.21
ZNF140P52738 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF140P52738 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF140P52738 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF140P52738 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF140P52738 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF140P52738 FOXO1B-201ENST00000504678 1527 ntBASIC16.36■□□□□ 0.21
ZNF140P52738 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.36■□□□□ 0.21
ZNF140P52738 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF140P52738 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF140P52738 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.36■□□□□ 0.21
ZNF140P52738 YBX1P5-201ENST00000509441 847 ntBASIC16.36■□□□□ 0.21
ZNF140P52738 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.36■□□□□ 0.21
ZNF140P52738 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.36■□□□□ 0.21
ZNF140P52738 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
ZNF140P52738 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.36■□□□□ 0.21
ZNF140P52738 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.36■□□□□ 0.21
ZNF140P52738 AC026120.1-201ENST00000611536 926 ntBASIC16.36■□□□□ 0.21
ZNF140P52738 AC008267.7-201ENST00000624570 1194 ntBASIC16.36■□□□□ 0.21
ZNF140P52738 ELL2P1-201ENST00000413990 1906 ntBASIC16.36■□□□□ 0.21
ZNF140P52738 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.36■□□□□ 0.21
ZNF140P52738 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF140P52738 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
ZNF140P52738 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.36■□□□□ 0.21
ZNF140P52738 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
ZNF140P52738 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
ZNF140P52738 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
ZNF140P52738 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF140P52738 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF140P52738 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF140P52738 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF140P52738 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF140P52738 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF140P52738 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
ZNF140P52738 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF140P52738 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF140P52738 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
ZNF140P52738 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF140P52738 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.35■□□□□ 0.21
ZNF140P52738 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.35■□□□□ 0.21
ZNF140P52738 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF140P52738 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF140P52738 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF140P52738 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
ZNF140P52738 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF140P52738 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
ZNF140P52738 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF140P52738 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF140P52738 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.35■□□□□ 0.21
ZNF140P52738 GPX1P2-201ENST00000429271 606 ntBASIC16.35■□□□□ 0.21
ZNF140P52738 SPCS2P4-201ENST00000436160 681 ntBASIC16.35■□□□□ 0.21
ZNF140P52738 SPDYE11-202ENST00000450699 704 ntBASIC16.35■□□□□ 0.21
ZNF140P52738 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.35■□□□□ 0.21
ZNF140P52738 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.35■□□□□ 0.21
ZNF140P52738 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.35■□□□□ 0.21
ZNF140P52738 AC105233.2-201ENST00000523697 349 ntBASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms