Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.71□□□□□ -0.06
CSNK1A1P48729 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
CSNK1A1P48729 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CSNK1A1P48729 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1A1P48729 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1A1P48729 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.7□□□□□ -0.06
CSNK1A1P48729 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1A1P48729 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1A1P48729 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.7□□□□□ -0.06
CSNK1A1P48729 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.7□□□□□ -0.06
CSNK1A1P48729 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.7□□□□□ -0.06
CSNK1A1P48729 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1A1P48729 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1A1P48729 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.7□□□□□ -0.06
CSNK1A1P48729 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.7□□□□□ -0.06
CSNK1A1P48729 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
CSNK1A1P48729 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1A1P48729 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CSNK1A1P48729 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1A1P48729 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CSNK1A1P48729 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.7□□□□□ -0.06
CSNK1A1P48729 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
CSNK1A1P48729 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.7□□□□□ -0.06
CSNK1A1P48729 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1A1P48729 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1A1P48729 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CSNK1A1P48729 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
CSNK1A1P48729 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1A1P48729 AC109635.5-201ENST00000533593 962 ntBASIC14.7□□□□□ -0.06
CSNK1A1P48729 PDPK2P-202ENST00000562415 1191 ntBASIC14.7□□□□□ -0.06
CSNK1A1P48729 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.7□□□□□ -0.06
CSNK1A1P48729 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1A1P48729 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.7□□□□□ -0.06
CSNK1A1P48729 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1A1P48729 AL009183.1-201ENST00000603760 355 ntBASIC14.7□□□□□ -0.06
CSNK1A1P48729 AC068137.2-201ENST00000605408 478 ntBASIC14.7□□□□□ -0.06
CSNK1A1P48729 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.7□□□□□ -0.06
CSNK1A1P48729 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.7□□□□□ -0.06
CSNK1A1P48729 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1A1P48729 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1A1P48729 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1A1P48729 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.7□□□□□ -0.06
CSNK1A1P48729 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CSNK1A1P48729 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CSNK1A1P48729 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1A1P48729 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CSNK1A1P48729 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.7□□□□□ -0.06
CSNK1A1P48729 AC005052.1-201ENST00000625181 2492 ntBASIC14.7□□□□□ -0.06
CSNK1A1P48729 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CSNK1A1P48729 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1A1P48729 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CSNK1A1P48729 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1A1P48729 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CSNK1A1P48729 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.7□□□□□ -0.06
CSNK1A1P48729 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1A1P48729 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.69□□□□□ -0.06
CSNK1A1P48729 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1A1P48729 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
CSNK1A1P48729 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1A1P48729 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.69□□□□□ -0.06
CSNK1A1P48729 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CSNK1A1P48729 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CSNK1A1P48729 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.69□□□□□ -0.06
CSNK1A1P48729 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1A1P48729 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1A1P48729 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1A1P48729 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1A1P48729 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.69□□□□□ -0.06
CSNK1A1P48729 AL662844.4-201ENST00000606367 2838 ntBASIC14.69□□□□□ -0.06
CSNK1A1P48729 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.69□□□□□ -0.06
CSNK1A1P48729 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1A1P48729 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1A1P48729 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1A1P48729 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1A1P48729 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.69□□□□□ -0.06
CSNK1A1P48729 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.69□□□□□ -0.06
CSNK1A1P48729 AC140658.5-201ENST00000438532 169 ntBASIC14.69□□□□□ -0.06
CSNK1A1P48729 AC074386.1-202ENST00000463561 864 ntBASIC14.69□□□□□ -0.06
CSNK1A1P48729 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CSNK1A1P48729 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.69□□□□□ -0.06
CSNK1A1P48729 KRT18P58-201ENST00000527480 1120 ntBASIC14.69□□□□□ -0.06
CSNK1A1P48729 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.69□□□□□ -0.06
CSNK1A1P48729 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CSNK1A1P48729 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.69□□□□□ -0.06
CSNK1A1P48729 AL513190.1-201ENST00000621254 727 ntBASIC14.69□□□□□ -0.06
CSNK1A1P48729 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.69□□□□□ -0.06
CSNK1A1P48729 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CSNK1A1P48729 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1A1P48729 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1A1P48729 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1A1P48729 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
CSNK1A1P48729 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1A1P48729 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.69□□□□□ -0.06
CSNK1A1P48729 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1A1P48729 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CSNK1A1P48729 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.69□□□□□ -0.06
CSNK1A1P48729 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CSNK1A1P48729 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1A1P48729 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1A1P48729 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms