Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRT20P35900 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.76■□□□□ 0.11
KRT20P35900 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.76■□□□□ 0.11
KRT20P35900 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.76■□□□□ 0.11
KRT20P35900 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRT20P35900 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KRT20P35900 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.76■□□□□ 0.11
KRT20P35900 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KRT20P35900 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
KRT20P35900 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRT20P35900 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.76■□□□□ 0.11
KRT20P35900 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRT20P35900 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.76■□□□□ 0.11
KRT20P35900 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KRT20P35900 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KRT20P35900 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.76■□□□□ 0.11
KRT20P35900 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KRT20P35900 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
KRT20P35900 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KRT20P35900 AC073621.1-201ENST00000392730 636 ntBASIC15.76■□□□□ 0.11
KRT20P35900 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRT20P35900 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRT20P35900 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
KRT20P35900 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.76■□□□□ 0.11
KRT20P35900 AC012640.2-201ENST00000561606 901 ntBASIC15.76■□□□□ 0.11
KRT20P35900 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.76■□□□□ 0.11
KRT20P35900 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.76■□□□□ 0.11
KRT20P35900 MIR7706-201ENST00000613747 67 ntBASIC15.76■□□□□ 0.11
KRT20P35900 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.76■□□□□ 0.11
KRT20P35900 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.76■□□□□ 0.11
KRT20P35900 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
KRT20P35900 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRT20P35900 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.76■□□□□ 0.11
KRT20P35900 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.76■□□□□ 0.11
KRT20P35900 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.76■□□□□ 0.11
KRT20P35900 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.76■□□□□ 0.11
KRT20P35900 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRT20P35900 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.76■□□□□ 0.11
KRT20P35900 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
KRT20P35900 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KRT20P35900 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.76■□□□□ 0.11
KRT20P35900 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.76■□□□□ 0.11
KRT20P35900 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KRT20P35900 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
KRT20P35900 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRT20P35900 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KRT20P35900 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRT20P35900 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
KRT20P35900 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KRT20P35900 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.75■□□□□ 0.11
KRT20P35900 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
KRT20P35900 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KRT20P35900 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
KRT20P35900 TUBB8P12-201ENST00000308911 1335 ntBASIC15.75■□□□□ 0.11
KRT20P35900 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KRT20P35900 HLA-A-201ENST00000376802 1334 ntBASIC15.75■□□□□ 0.11
KRT20P35900 TUBB7P-202ENST00000428444 1305 ntBASIC15.75■□□□□ 0.11
KRT20P35900 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.75■□□□□ 0.11
KRT20P35900 TUBB8P7-204ENST00000567960 1332 ntBASIC15.75■□□□□ 0.11
KRT20P35900 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KRT20P35900 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KRT20P35900 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.75■□□□□ 0.11
KRT20P35900 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.75■□□□□ 0.11
KRT20P35900 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KRT20P35900 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KRT20P35900 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.75■□□□□ 0.11
KRT20P35900 AC098831.1-202ENST00000438821 336 ntBASIC15.75■□□□□ 0.11
KRT20P35900 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.75■□□□□ 0.11
KRT20P35900 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.75■□□□□ 0.11
KRT20P35900 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.75■□□□□ 0.11
KRT20P35900 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.75■□□□□ 0.11
KRT20P35900 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
KRT20P35900 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
KRT20P35900 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.75■□□□□ 0.11
KRT20P35900 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.75■□□□□ 0.11
KRT20P35900 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.75■□□□□ 0.11
KRT20P35900 TERC-201ENST00000602385 541 ntBASIC15.75■□□□□ 0.11
KRT20P35900 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.75■□□□□ 0.11
KRT20P35900 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.75■□□□□ 0.11
KRT20P35900 AC116407.3-201ENST00000623905 1129 ntBASIC15.75■□□□□ 0.11
KRT20P35900 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.75■□□□□ 0.11
KRT20P35900 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.75■□□□□ 0.11
KRT20P35900 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.75■□□□□ 0.11
KRT20P35900 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
KRT20P35900 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.75■□□□□ 0.11
KRT20P35900 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.75■□□□□ 0.11
KRT20P35900 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
KRT20P35900 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.75■□□□□ 0.11
KRT20P35900 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
KRT20P35900 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KRT20P35900 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KRT20P35900 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
KRT20P35900 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
KRT20P35900 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
KRT20P35900 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.74■□□□□ 0.11
KRT20P35900 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.74■□□□□ 0.11
KRT20P35900 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
KRT20P35900 FRMD8P1-201ENST00000440433 1524 ntBASIC15.74■□□□□ 0.11
KRT20P35900 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.74■□□□□ 0.11
KRT20P35900 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms