Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.52■□□□□ 0.87
RFC4P35249 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RFC4P35249 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RFC4P35249 AL390961.4-201ENST00000623958 2535 ntBASIC20.52■□□□□ 0.87
RFC4P35249 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RFC4P35249 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.52■□□□□ 0.87
RFC4P35249 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFC4P35249 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFC4P35249 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFC4P35249 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RFC4P35249 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFC4P35249 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RFC4P35249 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFC4P35249 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFC4P35249 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC20.51■□□□□ 0.87
RFC4P35249 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFC4P35249 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFC4P35249 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
RFC4P35249 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RFC4P35249 USB1-203ENST00000539737 1212 ntTSL 2 BASIC20.51■□□□□ 0.87
RFC4P35249 AL583810.1-201ENST00000553344 1045 ntBASIC20.51■□□□□ 0.87
RFC4P35249 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC20.51■□□□□ 0.87
RFC4P35249 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC20.51■□□□□ 0.87
RFC4P35249 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC20.51■□□□□ 0.87
RFC4P35249 RPSAP52-203ENST00000622976 1023 ntBASIC20.51■□□□□ 0.87
RFC4P35249 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFC4P35249 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFC4P35249 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
RFC4P35249 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFC4P35249 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.51■□□□□ 0.87
RFC4P35249 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFC4P35249 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
RFC4P35249 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC20.51■□□□□ 0.87
RFC4P35249 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFC4P35249 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFC4P35249 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RFC4P35249 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.5■□□□□ 0.87
RFC4P35249 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC20.5■□□□□ 0.87
RFC4P35249 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RFC4P35249 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
RFC4P35249 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.5■□□□□ 0.87
RFC4P35249 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC20.5■□□□□ 0.87
RFC4P35249 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RFC4P35249 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RFC4P35249 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RFC4P35249 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC20.5■□□□□ 0.87
RFC4P35249 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RFC4P35249 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
RFC4P35249 CTBP2P5-201ENST00000454986 1264 ntBASIC20.5■□□□□ 0.87
RFC4P35249 SLC25A47P1-201ENST00000531577 414 ntBASIC20.5■□□□□ 0.87
RFC4P35249 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC20.5■□□□□ 0.87
RFC4P35249 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC20.5■□□□□ 0.87
RFC4P35249 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC20.5■□□□□ 0.87
RFC4P35249 MIR6787-201ENST00000616675 61 ntBASIC20.5■□□□□ 0.87
RFC4P35249 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RFC4P35249 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
RFC4P35249 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
RFC4P35249 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RFC4P35249 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RFC4P35249 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.5■□□□□ 0.87
RFC4P35249 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RFC4P35249 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RFC4P35249 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC20.5■□□□□ 0.87
RFC4P35249 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RFC4P35249 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
RFC4P35249 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
RFC4P35249 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RFC4P35249 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
RFC4P35249 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.49■□□□□ 0.87
RFC4P35249 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.49■□□□□ 0.87
RFC4P35249 PDIA3P1-201ENST00000471856 1510 ntBASIC20.49■□□□□ 0.87
RFC4P35249 RELA-227ENST00000615805 2236 ntTSL 5 BASIC20.49■□□□□ 0.87
RFC4P35249 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC20.49■□□□□ 0.87
RFC4P35249 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC20.49■□□□□ 0.87
RFC4P35249 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RFC4P35249 LBX2-201ENST00000341396 886 ntTSL 3 BASIC20.49■□□□□ 0.87
RFC4P35249 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RFC4P35249 MIR1908-201ENST00000410394 80 ntBASIC20.49■□□□□ 0.87
RFC4P35249 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RFC4P35249 HIST3H2BA-201ENST00000436555 524 ntBASIC20.49■□□□□ 0.87
RFC4P35249 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RFC4P35249 KLF2P4-201ENST00000451959 1225 ntBASIC20.49■□□□□ 0.87
RFC4P35249 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC20.49■□□□□ 0.87
RFC4P35249 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
RFC4P35249 RN7SL399P-201ENST00000471648 279 ntBASIC20.49■□□□□ 0.87
RFC4P35249 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC20.49■□□□□ 0.87
RFC4P35249 AP002490.2-201ENST00000524791 560 ntBASIC20.49■□□□□ 0.87
RFC4P35249 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC20.49■□□□□ 0.87
RFC4P35249 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC20.49■□□□□ 0.87
RFC4P35249 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC20.49■□□□□ 0.87
RFC4P35249 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC20.49■□□□□ 0.87
RFC4P35249 MIR6869-201ENST00000619434 62 ntBASIC20.49■□□□□ 0.87
RFC4P35249 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RFC4P35249 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RFC4P35249 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC20.49■□□□□ 0.87
RFC4P35249 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
RFC4P35249 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RFC4P35249 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RFC4P35249 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RFC4P35249 AC093525.8-201ENST00000624099 1342 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms