Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TNFSF4P23510 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TNFSF4P23510 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TNFSF4P23510 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TNFSF4P23510 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TNFSF4P23510 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TNFSF4P23510 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TNFSF4P23510 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TNFSF4P23510 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TNFSF4P23510 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TNFSF4P23510 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TNFSF4P23510 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TNFSF4P23510 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TNFSF4P23510 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TNFSF4P23510 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TNFSF4P23510 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TNFSF4P23510 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TNFSF4P23510 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.13□□□□□ -0.15
TNFSF4P23510 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TNFSF4P23510 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TNFSF4P23510 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TNFSF4P23510 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TNFSF4P23510 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.13□□□□□ -0.15
TNFSF4P23510 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TNFSF4P23510 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TNFSF4P23510 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TNFSF4P23510 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TNFSF4P23510 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
TNFSF4P23510 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TNFSF4P23510 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TNFSF4P23510 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.13□□□□□ -0.15
TNFSF4P23510 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TNFSF4P23510 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.13□□□□□ -0.15
TNFSF4P23510 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TNFSF4P23510 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TNFSF4P23510 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
TNFSF4P23510 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.13□□□□□ -0.15
TNFSF4P23510 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.13□□□□□ -0.15
TNFSF4P23510 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.13□□□□□ -0.15
TNFSF4P23510 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.13□□□□□ -0.15
TNFSF4P23510 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.13□□□□□ -0.15
TNFSF4P23510 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.13□□□□□ -0.15
TNFSF4P23510 SPDYE11-202ENST00000450699 704 ntBASIC14.13□□□□□ -0.15
TNFSF4P23510 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TNFSF4P23510 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.13□□□□□ -0.15
TNFSF4P23510 ALG1L5P-201ENST00000482043 771 ntBASIC14.13□□□□□ -0.15
TNFSF4P23510 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
TNFSF4P23510 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.13□□□□□ -0.15
TNFSF4P23510 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.13□□□□□ -0.15
TNFSF4P23510 SPDYE9P-201ENST00000570642 692 ntBASIC14.13□□□□□ -0.15
TNFSF4P23510 MIR4469-201ENST00000583919 79 ntBASIC14.13□□□□□ -0.15
TNFSF4P23510 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.13□□□□□ -0.15
TNFSF4P23510 SPDYE10P-202ENST00000612005 668 ntBASIC14.13□□□□□ -0.15
TNFSF4P23510 SPDYE8P-202ENST00000612377 668 ntBASIC14.13□□□□□ -0.15
TNFSF4P23510 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TNFSF4P23510 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TNFSF4P23510 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TNFSF4P23510 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
TNFSF4P23510 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TNFSF4P23510 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.13□□□□□ -0.15
TNFSF4P23510 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TNFSF4P23510 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.13□□□□□ -0.15
TNFSF4P23510 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TNFSF4P23510 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TNFSF4P23510 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TNFSF4P23510 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TNFSF4P23510 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TNFSF4P23510 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TNFSF4P23510 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.13□□□□□ -0.15
TNFSF4P23510 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.13□□□□□ -0.15
TNFSF4P23510 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFSF4P23510 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFSF4P23510 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.12□□□□□ -0.15
TNFSF4P23510 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFSF4P23510 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFSF4P23510 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
TNFSF4P23510 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
TNFSF4P23510 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFSF4P23510 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TNFSF4P23510 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFSF4P23510 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TNFSF4P23510 AL603756.1-201ENST00000606511 2163 ntBASIC14.12□□□□□ -0.15
TNFSF4P23510 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TNFSF4P23510 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFSF4P23510 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFSF4P23510 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TNFSF4P23510 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
TNFSF4P23510 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFSF4P23510 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFSF4P23510 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFSF4P23510 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFSF4P23510 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFSF4P23510 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFSF4P23510 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.12□□□□□ -0.15
TNFSF4P23510 AL355306.1-201ENST00000415580 579 ntBASIC14.12□□□□□ -0.15
TNFSF4P23510 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.12□□□□□ -0.15
TNFSF4P23510 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.12□□□□□ -0.15
TNFSF4P23510 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
TNFSF4P23510 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.12□□□□□ -0.15
TNFSF4P23510 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms