Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNA3P22001 TPO-206ENST00000382269 1155 ntTSL 5 BASIC19.91■□□□□ 0.78
KCNA3P22001 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KCNA3P22001 SLC25A24P2-201ENST00000415059 510 ntBASIC19.91■□□□□ 0.78
KCNA3P22001 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC19.91■□□□□ 0.78
KCNA3P22001 COG4-212ENST00000564653 590 ntTSL 5 BASIC19.91■□□□□ 0.78
KCNA3P22001 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC19.91■□□□□ 0.78
KCNA3P22001 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
KCNA3P22001 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC19.91■□□□□ 0.78
KCNA3P22001 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KCNA3P22001 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.91■□□□□ 0.78
KCNA3P22001 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNA3P22001 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KCNA3P22001 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.91■□□□□ 0.78
KCNA3P22001 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KCNA3P22001 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KCNA3P22001 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.91■□□□□ 0.78
KCNA3P22001 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNA3P22001 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNA3P22001 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KCNA3P22001 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
KCNA3P22001 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.9■□□□□ 0.78
KCNA3P22001 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KCNA3P22001 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC19.9■□□□□ 0.78
KCNA3P22001 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
KCNA3P22001 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
KCNA3P22001 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.9■□□□□ 0.78
KCNA3P22001 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
KCNA3P22001 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KCNA3P22001 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
KCNA3P22001 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC19.9■□□□□ 0.78
KCNA3P22001 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KCNA3P22001 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KCNA3P22001 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC19.9■□□□□ 0.78
KCNA3P22001 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
KCNA3P22001 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC19.9■□□□□ 0.78
KCNA3P22001 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC19.9■□□□□ 0.78
KCNA3P22001 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KCNA3P22001 FAM86HP-204ENST00000513466 959 ntBASIC19.9■□□□□ 0.78
KCNA3P22001 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC19.9■□□□□ 0.78
KCNA3P22001 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
KCNA3P22001 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC19.9■□□□□ 0.78
KCNA3P22001 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC19.9■□□□□ 0.78
KCNA3P22001 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
KCNA3P22001 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.9■□□□□ 0.78
KCNA3P22001 ATF5-205ENST00000600336 682 ntTSL 2 BASIC19.9■□□□□ 0.78
KCNA3P22001 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KCNA3P22001 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
KCNA3P22001 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC19.9■□□□□ 0.78
KCNA3P22001 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KCNA3P22001 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
KCNA3P22001 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KCNA3P22001 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.9■□□□□ 0.78
KCNA3P22001 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.9■□□□□ 0.78
KCNA3P22001 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.9■□□□□ 0.78
KCNA3P22001 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
KCNA3P22001 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KCNA3P22001 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KCNA3P22001 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KCNA3P22001 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KCNA3P22001 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KCNA3P22001 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.9■□□□□ 0.78
KCNA3P22001 AC004408.2-201ENST00000623613 2777 ntBASIC19.89■□□□□ 0.78
KCNA3P22001 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
KCNA3P22001 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KCNA3P22001 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KCNA3P22001 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC19.89■□□□□ 0.77
KCNA3P22001 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KCNA3P22001 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
KCNA3P22001 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KCNA3P22001 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
KCNA3P22001 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC19.89■□□□□ 0.77
KCNA3P22001 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
KCNA3P22001 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
KCNA3P22001 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KCNA3P22001 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
KCNA3P22001 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC19.89■□□□□ 0.77
KCNA3P22001 AC074338.1-201ENST00000416825 156 ntBASIC19.89■□□□□ 0.77
KCNA3P22001 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KCNA3P22001 AC016694.1-201ENST00000434179 700 ntBASIC19.89■□□□□ 0.77
KCNA3P22001 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
KCNA3P22001 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KCNA3P22001 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC19.89■□□□□ 0.77
KCNA3P22001 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
KCNA3P22001 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KCNA3P22001 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KCNA3P22001 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KCNA3P22001 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.89■□□□□ 0.77
KCNA3P22001 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.89■□□□□ 0.77
KCNA3P22001 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KCNA3P22001 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.89■□□□□ 0.77
KCNA3P22001 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC19.89■□□□□ 0.77
KCNA3P22001 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC19.89■□□□□ 0.77
KCNA3P22001 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KCNA3P22001 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC19.89■□□□□ 0.77
KCNA3P22001 AC008687.7-202ENST00000637404 953 ntBASIC19.89■□□□□ 0.77
KCNA3P22001 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KCNA3P22001 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KCNA3P22001 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KCNA3P22001 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms