Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.31■□□□□ 0.36
PDGFRAP16234 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFRAP16234 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFRAP16234 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
PDGFRAP16234 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PDGFRAP16234 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.31■□□□□ 0.36
PDGFRAP16234 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFRAP16234 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.31■□□□□ 0.36
PDGFRAP16234 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFRAP16234 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PDGFRAP16234 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.31■□□□□ 0.36
PDGFRAP16234 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.31■□□□□ 0.36
PDGFRAP16234 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PDGFRAP16234 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFRAP16234 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PDGFRAP16234 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PDGFRAP16234 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFRAP16234 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFRAP16234 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.31■□□□□ 0.36
PDGFRAP16234 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.31■□□□□ 0.36
PDGFRAP16234 POU5F1P6-201ENST00000466990 990 ntBASIC17.31■□□□□ 0.36
PDGFRAP16234 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.31■□□□□ 0.36
PDGFRAP16234 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.31■□□□□ 0.36
PDGFRAP16234 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.31■□□□□ 0.36
PDGFRAP16234 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PDGFRAP16234 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.31■□□□□ 0.36
PDGFRAP16234 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.31■□□□□ 0.36
PDGFRAP16234 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
PDGFRAP16234 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.31■□□□□ 0.36
PDGFRAP16234 C20orf181-201ENST00000623918 480 ntBASIC17.31■□□□□ 0.36
PDGFRAP16234 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.31■□□□□ 0.36
PDGFRAP16234 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFRAP16234 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFRAP16234 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFRAP16234 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.31■□□□□ 0.36
PDGFRAP16234 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
PDGFRAP16234 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFRAP16234 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFRAP16234 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFRAP16234 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.31■□□□□ 0.36
PDGFRAP16234 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFRAP16234 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFRAP16234 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFRAP16234 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFRAP16234 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.3■□□□□ 0.36
PDGFRAP16234 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PDGFRAP16234 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.3■□□□□ 0.36
PDGFRAP16234 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFRAP16234 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.3■□□□□ 0.36
PDGFRAP16234 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.3■□□□□ 0.36
PDGFRAP16234 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.3■□□□□ 0.36
PDGFRAP16234 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PDGFRAP16234 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFRAP16234 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFRAP16234 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFRAP16234 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFRAP16234 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PDGFRAP16234 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PDGFRAP16234 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFRAP16234 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PDGFRAP16234 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PDGFRAP16234 AC002056.1-201ENST00000395613 760 ntBASIC17.3■□□□□ 0.36
PDGFRAP16234 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.3■□□□□ 0.36
PDGFRAP16234 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFRAP16234 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFRAP16234 HTR5BP-201ENST00000430851 1154 ntBASIC17.3■□□□□ 0.36
PDGFRAP16234 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.3■□□□□ 0.36
PDGFRAP16234 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.3■□□□□ 0.36
PDGFRAP16234 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.3■□□□□ 0.36
PDGFRAP16234 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.3■□□□□ 0.36
PDGFRAP16234 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
PDGFRAP16234 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.3■□□□□ 0.36
PDGFRAP16234 AC005829.1-201ENST00000570002 483 ntBASIC17.3■□□□□ 0.36
PDGFRAP16234 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.3■□□□□ 0.36
PDGFRAP16234 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.3■□□□□ 0.36
PDGFRAP16234 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.3■□□□□ 0.36
PDGFRAP16234 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.3■□□□□ 0.36
PDGFRAP16234 AL691403.2-201ENST00000618460 490 ntBASIC17.3■□□□□ 0.36
PDGFRAP16234 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.3■□□□□ 0.36
PDGFRAP16234 CYP2T1P-202ENST00000641596 2535 ntBASIC17.3■□□□□ 0.36
PDGFRAP16234 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.3■□□□□ 0.36
PDGFRAP16234 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
PDGFRAP16234 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFRAP16234 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFRAP16234 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
PDGFRAP16234 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFRAP16234 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFRAP16234 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFRAP16234 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
PDGFRAP16234 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFRAP16234 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFRAP16234 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFRAP16234 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFRAP16234 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
PDGFRAP16234 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFRAP16234 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFRAP16234 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFRAP16234 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PDGFRAP16234 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PDGFRAP16234 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms