Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AL009183.1-201ENST00000603760 355 ntBASIC17.4■□□□□ 0.38
KRT3P12035 AC140113.2-201ENST00000604370 208 ntBASIC17.4■□□□□ 0.38
KRT3P12035 FAM197Y3-203ENST00000618346 717 ntBASIC17.4■□□□□ 0.38
KRT3P12035 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT3P12035 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT3P12035 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
KRT3P12035 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT3P12035 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT3P12035 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT3P12035 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT3P12035 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT3P12035 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
KRT3P12035 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
KRT3P12035 AC018695.7-201ENST00000624587 2492 ntBASIC17.4■□□□□ 0.38
KRT3P12035 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT3P12035 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT3P12035 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
KRT3P12035 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.39■□□□□ 0.38
KRT3P12035 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
KRT3P12035 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.39■□□□□ 0.38
KRT3P12035 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
KRT3P12035 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
KRT3P12035 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
KRT3P12035 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
KRT3P12035 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
KRT3P12035 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
KRT3P12035 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.39■□□□□ 0.37
KRT3P12035 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT3P12035 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT3P12035 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT3P12035 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT3P12035 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.39■□□□□ 0.37
KRT3P12035 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
KRT3P12035 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT3P12035 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
KRT3P12035 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT3P12035 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT3P12035 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT3P12035 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.39■□□□□ 0.37
KRT3P12035 AC140658.5-201ENST00000438532 169 ntBASIC17.39■□□□□ 0.37
KRT3P12035 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.39■□□□□ 0.37
KRT3P12035 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.39■□□□□ 0.37
KRT3P12035 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
KRT3P12035 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.39■□□□□ 0.37
KRT3P12035 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
KRT3P12035 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.39■□□□□ 0.37
KRT3P12035 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.39■□□□□ 0.37
KRT3P12035 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT3P12035 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.39■□□□□ 0.37
KRT3P12035 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT3P12035 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.39■□□□□ 0.37
KRT3P12035 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.39■□□□□ 0.37
KRT3P12035 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT3P12035 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
KRT3P12035 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT3P12035 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.39■□□□□ 0.37
KRT3P12035 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT3P12035 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT3P12035 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT3P12035 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT3P12035 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
KRT3P12035 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT3P12035 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT3P12035 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT3P12035 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.38■□□□□ 0.37
KRT3P12035 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KRT3P12035 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KRT3P12035 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT3P12035 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.38■□□□□ 0.37
KRT3P12035 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.38■□□□□ 0.37
KRT3P12035 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.38■□□□□ 0.37
KRT3P12035 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.38■□□□□ 0.37
KRT3P12035 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT3P12035 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
KRT3P12035 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT3P12035 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT3P12035 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KRT3P12035 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT3P12035 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
KRT3P12035 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT3P12035 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.38■□□□□ 0.37
KRT3P12035 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT3P12035 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT3P12035 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT3P12035 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
KRT3P12035 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.38■□□□□ 0.37
KRT3P12035 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
KRT3P12035 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT3P12035 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT3P12035 MTHFR-217ENST00000641820 1569 ntBASIC17.38■□□□□ 0.37
KRT3P12035 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.38■□□□□ 0.37
KRT3P12035 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.38■□□□□ 0.37
KRT3P12035 AC092474.2-201ENST00000424288 719 ntBASIC17.38■□□□□ 0.37
KRT3P12035 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KRT3P12035 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KRT3P12035 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.38■□□□□ 0.37
KRT3P12035 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.38■□□□□ 0.37
KRT3P12035 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.38■□□□□ 0.37
KRT3P12035 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KRT3P12035 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms