Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
APOEP02649 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
APOEP02649 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
APOEP02649 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
APOEP02649 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
APOEP02649 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
APOEP02649 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
APOEP02649 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
APOEP02649 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
APOEP02649 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
APOEP02649 AL355306.1-201ENST00000415580 579 ntBASIC17.3■□□□□ 0.36
APOEP02649 AC092474.2-201ENST00000424288 719 ntBASIC17.3■□□□□ 0.36
APOEP02649 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
APOEP02649 AC004967.1-201ENST00000453589 447 ntBASIC17.3■□□□□ 0.36
APOEP02649 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.3■□□□□ 0.36
APOEP02649 FAM86C2P-203ENST00000528684 1004 ntBASIC17.3■□□□□ 0.36
APOEP02649 RARRES2P8-201ENST00000566335 367 ntBASIC17.3■□□□□ 0.36
APOEP02649 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.3■□□□□ 0.36
APOEP02649 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.3■□□□□ 0.36
APOEP02649 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
APOEP02649 AC099522.2-201ENST00000607001 744 ntBASIC17.3■□□□□ 0.36
APOEP02649 GPALPP1-207ENST00000611650 899 ntBASIC17.3■□□□□ 0.36
APOEP02649 AC006538.3-201ENST00000612495 578 ntBASIC17.3■□□□□ 0.36
APOEP02649 AC139530.3-201ENST00000620344 690 ntBASIC17.3■□□□□ 0.36
APOEP02649 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
APOEP02649 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
APOEP02649 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
APOEP02649 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.3■□□□□ 0.36
APOEP02649 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
APOEP02649 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
APOEP02649 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
APOEP02649 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
APOEP02649 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
APOEP02649 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
APOEP02649 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.3■□□□□ 0.36
APOEP02649 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.3■□□□□ 0.36
APOEP02649 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
APOEP02649 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
APOEP02649 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
APOEP02649 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
APOEP02649 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
APOEP02649 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
APOEP02649 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
APOEP02649 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
APOEP02649 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
APOEP02649 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
APOEP02649 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
APOEP02649 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.29■□□□□ 0.36
APOEP02649 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.29■□□□□ 0.36
APOEP02649 AL671277.1-201ENST00000429656 993 ntBASIC17.29■□□□□ 0.36
APOEP02649 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.29■□□□□ 0.36
APOEP02649 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.29■□□□□ 0.36
APOEP02649 HLA-J-202ENST00000469281 1241 ntBASIC17.29■□□□□ 0.36
APOEP02649 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
APOEP02649 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.29■□□□□ 0.36
APOEP02649 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.29■□□□□ 0.36
APOEP02649 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
APOEP02649 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
APOEP02649 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.29■□□□□ 0.36
APOEP02649 AL691403.2-201ENST00000618460 490 ntBASIC17.29■□□□□ 0.36
APOEP02649 SNX33P1-201ENST00000592116 1762 ntBASIC17.29■□□□□ 0.36
APOEP02649 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
APOEP02649 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
APOEP02649 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
APOEP02649 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
APOEP02649 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.29■□□□□ 0.36
APOEP02649 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
APOEP02649 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.29■□□□□ 0.36
APOEP02649 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
APOEP02649 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
APOEP02649 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
APOEP02649 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
APOEP02649 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOEP02649 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOEP02649 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
APOEP02649 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOEP02649 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
APOEP02649 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOEP02649 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOEP02649 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOEP02649 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.28■□□□□ 0.36
APOEP02649 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.28■□□□□ 0.36
APOEP02649 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
APOEP02649 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.28■□□□□ 0.36
APOEP02649 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.28■□□□□ 0.36
APOEP02649 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
APOEP02649 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOEP02649 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.28■□□□□ 0.36
APOEP02649 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOEP02649 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOEP02649 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.28■□□□□ 0.36
APOEP02649 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOEP02649 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
APOEP02649 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
APOEP02649 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.28■□□□□ 0.36
APOEP02649 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.28■□□□□ 0.36
APOEP02649 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.28■□□□□ 0.36
APOEP02649 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
APOEP02649 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
APOEP02649 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms