Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC14.87□□□□□ -0.03
SPTA1P02549 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.87□□□□□ -0.03
SPTA1P02549 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPTA1P02549 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.87□□□□□ -0.03
SPTA1P02549 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPTA1P02549 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.87□□□□□ -0.03
SPTA1P02549 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPTA1P02549 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SPTA1P02549 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
SPTA1P02549 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPTA1P02549 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.87□□□□□ -0.03
SPTA1P02549 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPTA1P02549 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SPTA1P02549 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPTA1P02549 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.87□□□□□ -0.03
SPTA1P02549 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.87□□□□□ -0.03
SPTA1P02549 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.87□□□□□ -0.03
SPTA1P02549 SLC25A47P1-201ENST00000531577 414 ntBASIC14.87□□□□□ -0.03
SPTA1P02549 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.87□□□□□ -0.03
SPTA1P02549 AC233724.13-201ENST00000598383 410 ntBASIC14.87□□□□□ -0.03
SPTA1P02549 AL118558.3-201ENST00000607414 1079 ntBASIC14.87□□□□□ -0.03
SPTA1P02549 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPTA1P02549 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.87□□□□□ -0.03
SPTA1P02549 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPTA1P02549 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPTA1P02549 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SPTA1P02549 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SPTA1P02549 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SPTA1P02549 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPTA1P02549 AC004408.2-201ENST00000623613 2777 ntBASIC14.86□□□□□ -0.03
SPTA1P02549 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SPTA1P02549 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SPTA1P02549 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.86□□□□□ -0.03
SPTA1P02549 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SPTA1P02549 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SPTA1P02549 RN7SL828P-201ENST00000607615 303 ntBASIC14.86□□□□□ -0.03
SPTA1P02549 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.86□□□□□ -0.03
SPTA1P02549 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.86□□□□□ -0.03
SPTA1P02549 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.86□□□□□ -0.03
SPTA1P02549 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPTA1P02549 AC138028.4-201ENST00000564984 1845 ntBASIC14.86□□□□□ -0.03
SPTA1P02549 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SPTA1P02549 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SPTA1P02549 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPTA1P02549 CDC14C-201ENST00000428251 1719 ntBASIC14.86□□□□□ -0.03
SPTA1P02549 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SPTA1P02549 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.86□□□□□ -0.03
SPTA1P02549 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPTA1P02549 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.86□□□□□ -0.03
SPTA1P02549 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPTA1P02549 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.86□□□□□ -0.03
SPTA1P02549 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SPTA1P02549 AC104457.1-201ENST00000401024 814 ntBASIC14.86□□□□□ -0.03
SPTA1P02549 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.86□□□□□ -0.03
SPTA1P02549 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.86□□□□□ -0.03
SPTA1P02549 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
SPTA1P02549 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.86□□□□□ -0.03
SPTA1P02549 AC026979.3-201ENST00000607315 403 ntBASIC14.86□□□□□ -0.03
SPTA1P02549 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
SPTA1P02549 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
SPTA1P02549 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPTA1P02549 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPTA1P02549 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPTA1P02549 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.86□□□□□ -0.03
SPTA1P02549 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.85□□□□□ -0.03
SPTA1P02549 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SPTA1P02549 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SPTA1P02549 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPTA1P02549 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
SPTA1P02549 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.85□□□□□ -0.03
SPTA1P02549 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.85□□□□□ -0.03
SPTA1P02549 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.85□□□□□ -0.03
SPTA1P02549 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SPTA1P02549 HNRNPUP1-201ENST00000554987 333 ntBASIC14.85□□□□□ -0.03
SPTA1P02549 AL022328.1-201ENST00000610050 478 ntBASIC14.85□□□□□ -0.03
SPTA1P02549 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPTA1P02549 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPTA1P02549 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPTA1P02549 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.85□□□□□ -0.03
SPTA1P02549 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPTA1P02549 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPTA1P02549 AC093525.8-201ENST00000624099 1342 ntBASIC14.85□□□□□ -0.03
SPTA1P02549 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.85□□□□□ -0.03
SPTA1P02549 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SPTA1P02549 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPTA1P02549 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
SPTA1P02549 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPTA1P02549 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.85□□□□□ -0.03
SPTA1P02549 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SPTA1P02549 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.85□□□□□ -0.03
SPTA1P02549 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.85□□□□□ -0.03
SPTA1P02549 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.85□□□□□ -0.03
SPTA1P02549 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SPTA1P02549 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.85□□□□□ -0.03
SPTA1P02549 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPTA1P02549 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.85□□□□□ -0.03
SPTA1P02549 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SPTA1P02549 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
SPTA1P02549 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC14.84□□□□□ -0.03
SPTA1P02549 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms