Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-2O95096 AL671277.1-201ENST00000429656 993 ntBASIC15.19■□□□□ 0.02
NKX2-2O95096 ADH5P3-201ENST00000433842 1137 ntBASIC15.19■□□□□ 0.02
NKX2-2O95096 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.19■□□□□ 0.02
NKX2-2O95096 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.19■□□□□ 0.02
NKX2-2O95096 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
NKX2-2O95096 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
NKX2-2O95096 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-2O95096 PRYP6-201ENST00000514804 343 ntBASIC15.19■□□□□ 0.02
NKX2-2O95096 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.19■□□□□ 0.02
NKX2-2O95096 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.19■□□□□ 0.02
NKX2-2O95096 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-2O95096 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
NKX2-2O95096 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
NKX2-2O95096 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
NKX2-2O95096 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.19■□□□□ 0.02
NKX2-2O95096 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.19■□□□□ 0.02
NKX2-2O95096 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.19■□□□□ 0.02
NKX2-2O95096 MTDHP5-201ENST00000598980 586 ntBASIC15.19■□□□□ 0.02
NKX2-2O95096 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-2O95096 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-2O95096 C20orf181-201ENST00000623918 480 ntBASIC15.19■□□□□ 0.02
NKX2-2O95096 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.19■□□□□ 0.02
NKX2-2O95096 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
NKX2-2O95096 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-2O95096 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
NKX2-2O95096 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.19■□□□□ 0.02
NKX2-2O95096 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.19■□□□□ 0.02
NKX2-2O95096 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-2O95096 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-2O95096 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-2O95096 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-2O95096 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-2O95096 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-2O95096 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-2O95096 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-2O95096 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-2O95096 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.19■□□□□ 0.02
NKX2-2O95096 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.19■□□□□ 0.02
NKX2-2O95096 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-2O95096 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-2O95096 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-2O95096 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.18■□□□□ 0.02
NKX2-2O95096 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-2O95096 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NKX2-2O95096 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-2O95096 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-2O95096 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
NKX2-2O95096 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-2O95096 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.18■□□□□ 0.02
NKX2-2O95096 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.18■□□□□ 0.02
NKX2-2O95096 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-2O95096 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NKX2-2O95096 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-2O95096 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-2O95096 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NKX2-2O95096 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.18■□□□□ 0.02
NKX2-2O95096 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-2O95096 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-2O95096 TFAMP1-201ENST00000412727 736 ntBASIC15.18■□□□□ 0.02
NKX2-2O95096 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.18■□□□□ 0.02
NKX2-2O95096 MKNK2P1-201ENST00000437526 628 ntBASIC15.18■□□□□ 0.02
NKX2-2O95096 ACTG1P14-201ENST00000446382 1122 ntBASIC15.18■□□□□ 0.02
NKX2-2O95096 FAM86C2P-203ENST00000528684 1004 ntBASIC15.18■□□□□ 0.02
NKX2-2O95096 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-2O95096 AC073389.1-201ENST00000595595 795 ntBASIC15.18■□□□□ 0.02
NKX2-2O95096 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.18■□□□□ 0.02
NKX2-2O95096 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.18■□□□□ 0.02
NKX2-2O95096 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NKX2-2O95096 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-2O95096 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-2O95096 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-2O95096 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-2O95096 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.18■□□□□ 0.02
NKX2-2O95096 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-2O95096 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-2O95096 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-2O95096 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-2O95096 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.18■□□□□ 0.02
NKX2-2O95096 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-2O95096 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-2O95096 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-2O95096 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NKX2-2O95096 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NKX2-2O95096 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NKX2-2O95096 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NKX2-2O95096 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.17■□□□□ 0.02
NKX2-2O95096 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NKX2-2O95096 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.17■□□□□ 0.02
NKX2-2O95096 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NKX2-2O95096 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NKX2-2O95096 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.17■□□□□ 0.02
NKX2-2O95096 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX2-2O95096 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX2-2O95096 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
NKX2-2O95096 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.17■□□□□ 0.02
NKX2-2O95096 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
NKX2-2O95096 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.17■□□□□ 0.02
NKX2-2O95096 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.17■□□□□ 0.02
NKX2-2O95096 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms