Protein–RNA interactions for Protein: O60423

ATP8B3, Phospholipid-transporting ATPase IK, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP8B3O60423 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.79■□□□□ 0.44
ATP8B3O60423 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.79■□□□□ 0.44
ATP8B3O60423 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.79■□□□□ 0.44
ATP8B3O60423 CYP2A7P1-201ENST00000595391 815 ntBASIC17.79■□□□□ 0.44
ATP8B3O60423 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.79■□□□□ 0.44
ATP8B3O60423 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.79■□□□□ 0.44
ATP8B3O60423 AC079781.4-201ENST00000641908 219 ntBASIC17.79■□□□□ 0.44
ATP8B3O60423 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ATP8B3O60423 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP8B3O60423 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP8B3O60423 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.79■□□□□ 0.44
ATP8B3O60423 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.79■□□□□ 0.44
ATP8B3O60423 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.79■□□□□ 0.44
ATP8B3O60423 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.79■□□□□ 0.44
ATP8B3O60423 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP8B3O60423 AC006449.6-201ENST00000612330 2296 ntBASIC17.79■□□□□ 0.44
ATP8B3O60423 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP8B3O60423 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP8B3O60423 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ATP8B3O60423 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP8B3O60423 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.79■□□□□ 0.44
ATP8B3O60423 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
ATP8B3O60423 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.79■□□□□ 0.44
ATP8B3O60423 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP8B3O60423 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP8B3O60423 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP8B3O60423 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.78■□□□□ 0.44
ATP8B3O60423 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.78■□□□□ 0.44
ATP8B3O60423 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ATP8B3O60423 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.78■□□□□ 0.44
ATP8B3O60423 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.78■□□□□ 0.44
ATP8B3O60423 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ATP8B3O60423 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.78■□□□□ 0.44
ATP8B3O60423 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
ATP8B3O60423 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.78■□□□□ 0.44
ATP8B3O60423 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP8B3O60423 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.78■□□□□ 0.44
ATP8B3O60423 AC211486.1-202ENST00000416371 468 ntBASIC17.78■□□□□ 0.44
ATP8B3O60423 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.78■□□□□ 0.44
ATP8B3O60423 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.78■□□□□ 0.44
ATP8B3O60423 AC004967.1-201ENST00000453589 447 ntBASIC17.78■□□□□ 0.44
ATP8B3O60423 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.78■□□□□ 0.44
ATP8B3O60423 AC211476.1-201ENST00000503899 468 ntBASIC17.78■□□□□ 0.44
ATP8B3O60423 YBX1P5-201ENST00000509441 847 ntBASIC17.78■□□□□ 0.44
ATP8B3O60423 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.78■□□□□ 0.44
ATP8B3O60423 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP8B3O60423 MIR3909-201ENST00000579518 119 ntBASIC17.78■□□□□ 0.44
ATP8B3O60423 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.78■□□□□ 0.44
ATP8B3O60423 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP8B3O60423 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.78■□□□□ 0.44
ATP8B3O60423 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.78■□□□□ 0.44
ATP8B3O60423 AL031055.1-201ENST00000606362 631 ntBASIC17.78■□□□□ 0.44
ATP8B3O60423 AL691403.2-201ENST00000618460 490 ntBASIC17.78■□□□□ 0.44
ATP8B3O60423 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP8B3O60423 ELL2P1-201ENST00000413990 1906 ntBASIC17.78■□□□□ 0.44
ATP8B3O60423 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.78■□□□□ 0.44
ATP8B3O60423 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP8B3O60423 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.78■□□□□ 0.44
ATP8B3O60423 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
ATP8B3O60423 LINC01144-201ENST00000626198 1710 ntBASIC17.78■□□□□ 0.44
ATP8B3O60423 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP8B3O60423 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.78■□□□□ 0.44
ATP8B3O60423 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ATP8B3O60423 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP8B3O60423 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ATP8B3O60423 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP8B3O60423 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP8B3O60423 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.78■□□□□ 0.44
ATP8B3O60423 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP8B3O60423 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP8B3O60423 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP8B3O60423 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.78■□□□□ 0.44
ATP8B3O60423 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATP8B3O60423 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATP8B3O60423 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATP8B3O60423 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.77■□□□□ 0.44
ATP8B3O60423 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ATP8B3O60423 CEND1P1-201ENST00000451006 455 ntBASIC17.77■□□□□ 0.44
ATP8B3O60423 MIR4469-201ENST00000583919 79 ntBASIC17.77■□□□□ 0.44
ATP8B3O60423 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.77■□□□□ 0.44
ATP8B3O60423 AL161645.1-201ENST00000622716 1255 ntBASIC17.77■□□□□ 0.44
ATP8B3O60423 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ATP8B3O60423 AC092919.2-201ENST00000623631 1645 ntBASIC17.77■□□□□ 0.44
ATP8B3O60423 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.44
ATP8B3O60423 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ATP8B3O60423 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
ATP8B3O60423 AC005052.1-201ENST00000625181 2492 ntBASIC17.77■□□□□ 0.44
ATP8B3O60423 GPAA1P2-202ENST00000606848 1787 ntBASIC17.77■□□□□ 0.44
ATP8B3O60423 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.77■□□□□ 0.44
ATP8B3O60423 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATP8B3O60423 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
ATP8B3O60423 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.77■□□□□ 0.44
ATP8B3O60423 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATP8B3O60423 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ATP8B3O60423 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATP8B3O60423 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ATP8B3O60423 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATP8B3O60423 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.77■□□□□ 0.43
ATP8B3O60423 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.77■□□□□ 0.43
ATP8B3O60423 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms