Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGA12O60330 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA12O60330 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA12O60330 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA12O60330 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA12O60330 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA12O60330 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA12O60330 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PCDHGA12O60330 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA12O60330 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA12O60330 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PCDHGA12O60330 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.35■□□□□ 0.21
PCDHGA12O60330 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA12O60330 CROCCP1-201ENST00000426910 5675 ntBASIC16.35■□□□□ 0.21
PCDHGA12O60330 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA12O60330 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA12O60330 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA12O60330 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA12O60330 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA12O60330 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA12O60330 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA12O60330 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA12O60330 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA12O60330 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.35■□□□□ 0.21
PCDHGA12O60330 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PCDHGA12O60330 AC027369.6-201ENST00000525520 931 ntBASIC16.35■□□□□ 0.21
PCDHGA12O60330 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.35■□□□□ 0.21
PCDHGA12O60330 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHGA12O60330 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA12O60330 AC018529.1-201ENST00000613063 361 ntBASIC16.35■□□□□ 0.21
PCDHGA12O60330 AL590560.3-201ENST00000623350 461 ntBASIC16.35■□□□□ 0.21
PCDHGA12O60330 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHGA12O60330 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA12O60330 PCDHA14-201ENST00000506751 2298 ntBASIC16.35■□□□□ 0.21
PCDHGA12O60330 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA12O60330 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA12O60330 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
PCDHGA12O60330 AC100757.3-201ENST00000622361 1406 ntBASIC16.35■□□□□ 0.21
PCDHGA12O60330 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHGA12O60330 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.35■□□□□ 0.21
PCDHGA12O60330 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA12O60330 EGFEM1P-202ENST00000431685 1563 ntBASIC16.34■□□□□ 0.21
PCDHGA12O60330 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
PCDHGA12O60330 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA12O60330 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
PCDHGA12O60330 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PCDHGA12O60330 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
PCDHGA12O60330 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PCDHGA12O60330 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA12O60330 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA12O60330 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA12O60330 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA12O60330 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA12O60330 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA12O60330 MRPS18AP1-201ENST00000414458 589 ntBASIC16.34■□□□□ 0.21
PCDHGA12O60330 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGA12O60330 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDHGA12O60330 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA12O60330 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGA12O60330 AC105233.2-201ENST00000523697 349 ntBASIC16.34■□□□□ 0.21
PCDHGA12O60330 AF228730.5-201ENST00000530288 346 ntBASIC16.34■□□□□ 0.21
PCDHGA12O60330 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA12O60330 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA12O60330 AL662799.1-202ENST00000614205 422 ntBASIC16.34■□□□□ 0.21
PCDHGA12O60330 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGA12O60330 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGA12O60330 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGA12O60330 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA12O60330 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA12O60330 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGA12O60330 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA12O60330 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA12O60330 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PCDHGA12O60330 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGA12O60330 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA12O60330 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PCDHGA12O60330 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA12O60330 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA12O60330 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA12O60330 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PCDHGA12O60330 AC131009.4-201ENST00000624048 1740 ntBASIC16.33■□□□□ 0.21
PCDHGA12O60330 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGA12O60330 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
PCDHGA12O60330 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGA12O60330 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.33■□□□□ 0.21
PCDHGA12O60330 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGA12O60330 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGA12O60330 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGA12O60330 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGA12O60330 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.33■□□□□ 0.21
PCDHGA12O60330 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGA12O60330 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.33■□□□□ 0.21
PCDHGA12O60330 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.33■□□□□ 0.21
PCDHGA12O60330 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.21
PCDHGA12O60330 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
PCDHGA12O60330 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGA12O60330 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA12O60330 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA12O60330 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA12O60330 TSSK5P-201ENST00000423978 907 ntBASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms