Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMARCA5O60264 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC20.33■□□□□ 0.85
SMARCA5O60264 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMARCA5O60264 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMARCA5O60264 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC20.33■□□□□ 0.85
SMARCA5O60264 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SMARCA5O60264 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SMARCA5O60264 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMARCA5O60264 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC20.33■□□□□ 0.85
SMARCA5O60264 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMARCA5O60264 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMARCA5O60264 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMARCA5O60264 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMARCA5O60264 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMARCA5O60264 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SMARCA5O60264 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SMARCA5O60264 AC002056.1-201ENST00000395613 760 ntBASIC20.33■□□□□ 0.85
SMARCA5O60264 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMARCA5O60264 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
SMARCA5O60264 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SMARCA5O60264 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC20.33■□□□□ 0.85
SMARCA5O60264 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.33■□□□□ 0.85
SMARCA5O60264 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.33■□□□□ 0.85
SMARCA5O60264 IGHV3OR16-6-201ENST00000568775 360 ntBASIC20.33■□□□□ 0.85
SMARCA5O60264 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
SMARCA5O60264 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC20.33■□□□□ 0.85
SMARCA5O60264 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
SMARCA5O60264 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SMARCA5O60264 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SMARCA5O60264 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
SMARCA5O60264 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SMARCA5O60264 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SMARCA5O60264 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
SMARCA5O60264 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SMARCA5O60264 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC20.32■□□□□ 0.84
SMARCA5O60264 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCA5O60264 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCA5O60264 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCA5O60264 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCA5O60264 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCA5O60264 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC20.32■□□□□ 0.84
SMARCA5O60264 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC20.32■□□□□ 0.84
SMARCA5O60264 AC006449.6-201ENST00000612330 2296 ntBASIC20.32■□□□□ 0.84
SMARCA5O60264 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SMARCA5O60264 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.32■□□□□ 0.84
SMARCA5O60264 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.32■□□□□ 0.84
SMARCA5O60264 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.32■□□□□ 0.84
SMARCA5O60264 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC20.32■□□□□ 0.84
SMARCA5O60264 AC112191.1-201ENST00000523689 701 ntBASIC20.32■□□□□ 0.84
SMARCA5O60264 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SMARCA5O60264 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCA5O60264 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.32■□□□□ 0.84
SMARCA5O60264 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC20.32■□□□□ 0.84
SMARCA5O60264 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCA5O60264 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCA5O60264 WASH6P-202ENST00000359512 1437 ntBASIC20.32■□□□□ 0.84
SMARCA5O60264 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC20.32■□□□□ 0.84
SMARCA5O60264 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC20.32■□□□□ 0.84
SMARCA5O60264 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC20.32■□□□□ 0.84
SMARCA5O60264 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCA5O60264 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
SMARCA5O60264 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SMARCA5O60264 AC073439.1-201ENST00000624121 1774 ntBASIC20.31■□□□□ 0.84
SMARCA5O60264 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC20.31■□□□□ 0.84
SMARCA5O60264 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCA5O60264 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCA5O60264 AGK-211ENST00000629555 2765 ntTSL 5 BASIC20.31■□□□□ 0.84
SMARCA5O60264 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCA5O60264 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCA5O60264 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SMARCA5O60264 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCA5O60264 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCA5O60264 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.31■□□□□ 0.84
SMARCA5O60264 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCA5O60264 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.31■□□□□ 0.84
SMARCA5O60264 ADH5P3-201ENST00000433842 1137 ntBASIC20.31■□□□□ 0.84
SMARCA5O60264 KRT18P34-201ENST00000488218 1270 ntBASIC20.31■□□□□ 0.84
SMARCA5O60264 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SMARCA5O60264 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCA5O60264 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.31■□□□□ 0.84
SMARCA5O60264 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCA5O60264 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCA5O60264 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCA5O60264 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.31■□□□□ 0.84
SMARCA5O60264 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SMARCA5O60264 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCA5O60264 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCA5O60264 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC20.31■□□□□ 0.84
SMARCA5O60264 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCA5O60264 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SMARCA5O60264 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCA5O60264 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC20.3■□□□□ 0.84
SMARCA5O60264 FUK-207ENST00000571514 3054 ntTSL 2 BASIC20.3■□□□□ 0.84
SMARCA5O60264 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCA5O60264 MTHFR-217ENST00000641820 1569 ntBASIC20.3■□□□□ 0.84
SMARCA5O60264 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCA5O60264 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC20.3■□□□□ 0.84
SMARCA5O60264 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCA5O60264 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCA5O60264 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms