Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3EO15041 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3EO15041 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.72■□□□□ 0.75
SEMA3EO15041 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.72■□□□□ 0.75
SEMA3EO15041 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3EO15041 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.72■□□□□ 0.75
SEMA3EO15041 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.72■□□□□ 0.75
SEMA3EO15041 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.72■□□□□ 0.75
SEMA3EO15041 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3EO15041 AD000864.1-201ENST00000624076 2295 ntBASIC19.72■□□□□ 0.75
SEMA3EO15041 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3EO15041 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3EO15041 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3EO15041 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.72■□□□□ 0.75
SEMA3EO15041 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA3EO15041 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SEMA3EO15041 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA3EO15041 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA3EO15041 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
SEMA3EO15041 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA3EO15041 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.71■□□□□ 0.75
SEMA3EO15041 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.71■□□□□ 0.75
SEMA3EO15041 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SEMA3EO15041 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA3EO15041 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA3EO15041 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA3EO15041 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.71■□□□□ 0.75
SEMA3EO15041 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA3EO15041 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC19.71■□□□□ 0.75
SEMA3EO15041 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA3EO15041 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA3EO15041 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.71■□□□□ 0.75
SEMA3EO15041 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC19.71■□□□□ 0.75
SEMA3EO15041 AC008738.7-201ENST00000609744 511 ntBASIC19.71■□□□□ 0.75
SEMA3EO15041 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA3EO15041 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA3EO15041 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.71■□□□□ 0.75
SEMA3EO15041 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA3EO15041 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SEMA3EO15041 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA3EO15041 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA3EO15041 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.71■□□□□ 0.75
SEMA3EO15041 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA3EO15041 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.71■□□□□ 0.75
SEMA3EO15041 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA3EO15041 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.71■□□□□ 0.75
SEMA3EO15041 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA3EO15041 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEMA3EO15041 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
SEMA3EO15041 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEMA3EO15041 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.7■□□□□ 0.74
SEMA3EO15041 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SEMA3EO15041 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEMA3EO15041 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEMA3EO15041 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SEMA3EO15041 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.7■□□□□ 0.74
SEMA3EO15041 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SEMA3EO15041 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEMA3EO15041 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SEMA3EO15041 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SEMA3EO15041 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEMA3EO15041 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SEMA3EO15041 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.7■□□□□ 0.74
SEMA3EO15041 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.7■□□□□ 0.74
SEMA3EO15041 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC19.7■□□□□ 0.74
SEMA3EO15041 SPTLC1P1-201ENST00000447199 261 ntBASIC19.7■□□□□ 0.74
SEMA3EO15041 RN7SL618P-201ENST00000477850 296 ntBASIC19.7■□□□□ 0.74
SEMA3EO15041 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SEMA3EO15041 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC19.7■□□□□ 0.74
SEMA3EO15041 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEMA3EO15041 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEMA3EO15041 AC010336.2-201ENST00000564226 506 ntBASIC19.7■□□□□ 0.74
SEMA3EO15041 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.7■□□□□ 0.74
SEMA3EO15041 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEMA3EO15041 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
SEMA3EO15041 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.7■□□□□ 0.74
SEMA3EO15041 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.7■□□□□ 0.74
SEMA3EO15041 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEMA3EO15041 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SEMA3EO15041 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEMA3EO15041 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SEMA3EO15041 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SEMA3EO15041 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEMA3EO15041 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEMA3EO15041 TDG-209ENST00000544861 1387 ntTSL 2 BASIC19.7■□□□□ 0.74
SEMA3EO15041 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEMA3EO15041 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.69■□□□□ 0.74
SEMA3EO15041 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEMA3EO15041 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEMA3EO15041 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEMA3EO15041 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.69■□□□□ 0.74
SEMA3EO15041 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEMA3EO15041 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.69■□□□□ 0.74
SEMA3EO15041 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEMA3EO15041 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SEMA3EO15041 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEMA3EO15041 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SEMA3EO15041 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SEMA3EO15041 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.69■□□□□ 0.74
SEMA3EO15041 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms