Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLIC1O00299 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CLIC1O00299 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLIC1O00299 UPK3BP1-201ENST00000428678 509 ntBASIC15.6■□□□□ 0.09
CLIC1O00299 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.6■□□□□ 0.09
CLIC1O00299 HCG4P8-203ENST00000443049 980 ntBASIC15.6■□□□□ 0.09
CLIC1O00299 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.6■□□□□ 0.09
CLIC1O00299 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.6■□□□□ 0.09
CLIC1O00299 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.6■□□□□ 0.09
CLIC1O00299 AC107918.4-202ENST00000641623 219 ntBASIC15.6■□□□□ 0.09
CLIC1O00299 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLIC1O00299 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.6■□□□□ 0.09
CLIC1O00299 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.6■□□□□ 0.09
CLIC1O00299 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLIC1O00299 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.6■□□□□ 0.09
CLIC1O00299 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CLIC1O00299 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLIC1O00299 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.6■□□□□ 0.09
CLIC1O00299 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLIC1O00299 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.6■□□□□ 0.09
CLIC1O00299 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CLIC1O00299 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLIC1O00299 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.6■□□□□ 0.09
CLIC1O00299 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLIC1O00299 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.59■□□□□ 0.09
CLIC1O00299 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLIC1O00299 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLIC1O00299 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLIC1O00299 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLIC1O00299 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLIC1O00299 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLIC1O00299 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLIC1O00299 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLIC1O00299 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.59■□□□□ 0.09
CLIC1O00299 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.59■□□□□ 0.09
CLIC1O00299 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.59■□□□□ 0.09
CLIC1O00299 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.59■□□□□ 0.09
CLIC1O00299 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CLIC1O00299 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.59■□□□□ 0.09
CLIC1O00299 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.59■□□□□ 0.09
CLIC1O00299 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLIC1O00299 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.59■□□□□ 0.09
CLIC1O00299 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.59■□□□□ 0.09
CLIC1O00299 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.59■□□□□ 0.09
CLIC1O00299 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.59■□□□□ 0.09
CLIC1O00299 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
CLIC1O00299 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLIC1O00299 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLIC1O00299 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CLIC1O00299 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLIC1O00299 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.59■□□□□ 0.09
CLIC1O00299 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.59■□□□□ 0.09
CLIC1O00299 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLIC1O00299 AL596257.1-201ENST00000641463 2694 ntBASIC15.59■□□□□ 0.09
CLIC1O00299 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.59■□□□□ 0.09
CLIC1O00299 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CLIC1O00299 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLIC1O00299 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLIC1O00299 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLIC1O00299 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLIC1O00299 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLIC1O00299 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLIC1O00299 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLIC1O00299 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CLIC1O00299 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLIC1O00299 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.58■□□□□ 0.09
CLIC1O00299 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLIC1O00299 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.58■□□□□ 0.09
CLIC1O00299 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.58■□□□□ 0.09
CLIC1O00299 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLIC1O00299 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
CLIC1O00299 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLIC1O00299 CDC14C-201ENST00000428251 1719 ntBASIC15.58■□□□□ 0.08
CLIC1O00299 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLIC1O00299 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLIC1O00299 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLIC1O00299 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLIC1O00299 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
CLIC1O00299 SAPCD2P3-201ENST00000455031 850 ntBASIC15.58■□□□□ 0.08
CLIC1O00299 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLIC1O00299 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
CLIC1O00299 LINC01711-201ENST00000598340 967 ntBASIC15.58■□□□□ 0.08
CLIC1O00299 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLIC1O00299 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.58■□□□□ 0.08
CLIC1O00299 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CLIC1O00299 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLIC1O00299 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CLIC1O00299 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLIC1O00299 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLIC1O00299 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
CLIC1O00299 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLIC1O00299 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLIC1O00299 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.58■□□□□ 0.08
CLIC1O00299 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLIC1O00299 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
CLIC1O00299 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLIC1O00299 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.58■□□□□ 0.08
CLIC1O00299 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.58■□□□□ 0.08
CLIC1O00299 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLIC1O00299 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms