Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TMEM88BA6NKF7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM88BA6NKF7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM88BA6NKF7 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 AC006001.1-201ENST00000325130 474 ntBASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 AL355334.1-201ENST00000417713 215 ntBASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 RN7SL720P-201ENST00000488178 304 ntBASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 HNRNPA1P48-202ENST00000565308 961 ntBASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 KLK3-207ENST00000595952 969 ntTSL 3 BASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 AL136982.4-201ENST00000437689 1740 ntBASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 AL355312.1-201ENST00000407115 2176 ntBASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMEM88BA6NKF7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 TUBB8P12-201ENST00000308911 1335 ntBASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 TUBB7P-202ENST00000428444 1305 ntBASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 TUBB8P7-204ENST00000567960 1332 ntBASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 AC008267.1-201ENST00000474858 1069 ntBASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 ACR-203ENST00000529621 708 ntTSL 5 BASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 CU633904.3-201ENST00000624042 1029 ntBASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM88BA6NKF7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TMEM88BA6NKF7 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TMEM88BA6NKF7 SNX33P1-201ENST00000592116 1762 ntBASIC18.83■□□□□ 0.61
TMEM88BA6NKF7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.83■□□□□ 0.61
TMEM88BA6NKF7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
TMEM88BA6NKF7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TMEM88BA6NKF7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
TMEM88BA6NKF7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
TMEM88BA6NKF7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TMEM88BA6NKF7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
TMEM88BA6NKF7 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.83■□□□□ 0.61
TMEM88BA6NKF7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.83■□□□□ 0.61
TMEM88BA6NKF7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMEM88BA6NKF7 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TMEM88BA6NKF7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMEM88BA6NKF7 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TMEM88BA6NKF7 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TMEM88BA6NKF7 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC18.83■□□□□ 0.6
TMEM88BA6NKF7 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMEM88BA6NKF7 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms