Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TCRBV9S1A1TA0A576 AC144831.1-201ENST00000573312 2656 ntBASIC16.63■□□□□ 0.25
TCRBV9S1A1TA0A576 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TCRBV9S1A1TA0A576 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TCRBV9S1A1TA0A576 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TCRBV9S1A1TA0A576 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TCRBV9S1A1TA0A576 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TCRBV9S1A1TA0A576 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.63■□□□□ 0.25
TCRBV9S1A1TA0A576 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.63■□□□□ 0.25
TCRBV9S1A1TA0A576 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TCRBV9S1A1TA0A576 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.63■□□□□ 0.25
TCRBV9S1A1TA0A576 UPK3BP1-201ENST00000428678 509 ntBASIC16.63■□□□□ 0.25
TCRBV9S1A1TA0A576 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.63■□□□□ 0.25
TCRBV9S1A1TA0A576 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.63■□□□□ 0.25
TCRBV9S1A1TA0A576 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.63■□□□□ 0.25
TCRBV9S1A1TA0A576 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.63■□□□□ 0.25
TCRBV9S1A1TA0A576 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.63■□□□□ 0.25
TCRBV9S1A1TA0A576 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.63■□□□□ 0.25
TCRBV9S1A1TA0A576 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.63■□□□□ 0.25
TCRBV9S1A1TA0A576 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.63■□□□□ 0.25
TCRBV9S1A1TA0A576 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.63■□□□□ 0.25
TCRBV9S1A1TA0A576 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.63■□□□□ 0.25
TCRBV9S1A1TA0A576 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TCRBV9S1A1TA0A576 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.63■□□□□ 0.25
TCRBV9S1A1TA0A576 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.63■□□□□ 0.25
TCRBV9S1A1TA0A576 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.63■□□□□ 0.25
TCRBV9S1A1TA0A576 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.63■□□□□ 0.25
TCRBV9S1A1TA0A576 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TCRBV9S1A1TA0A576 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TCRBV9S1A1TA0A576 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.63■□□□□ 0.25
TCRBV9S1A1TA0A576 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
TCRBV9S1A1TA0A576 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.63■□□□□ 0.25
TCRBV9S1A1TA0A576 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 AL592424.1-201ENST00000563624 1536 ntBASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 AC136632.2-201ENST00000512891 861 ntBASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 AC008667.4-201ENST00000607370 168 ntBASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 AC005622.1-201ENST00000636801 1703 ntBASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TCRBV9S1A1TA0A576 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 MIR648-201ENST00000385046 94 ntBASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms