Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 MTND6P24-201ENST00000440466 518 ntBASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 AC190387.1-201ENST00000551683 408 ntBASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CTDP1Q9Y5B0 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTDP1Q9Y5B0 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.03■□□□□ 0.64
CTDP1Q9Y5B0 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTDP1Q9Y5B0 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTDP1Q9Y5B0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CTDP1Q9Y5B0 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
CTDP1Q9Y5B0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
CTDP1Q9Y5B0 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTDP1Q9Y5B0 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTDP1Q9Y5B0 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTDP1Q9Y5B0 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CTDP1Q9Y5B0 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.03■□□□□ 0.64
CTDP1Q9Y5B0 AC002472.2-201ENST00000442739 958 ntBASIC19.03■□□□□ 0.64
CTDP1Q9Y5B0 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTDP1Q9Y5B0 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.03■□□□□ 0.64
CTDP1Q9Y5B0 AC020765.3-201ENST00000613051 740 ntBASIC19.03■□□□□ 0.64
CTDP1Q9Y5B0 AL139011.1-202ENST00000642063 584 ntBASIC19.03■□□□□ 0.64
CTDP1Q9Y5B0 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.03■□□□□ 0.64
CTDP1Q9Y5B0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTDP1Q9Y5B0 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTDP1Q9Y5B0 AL035456.1-201ENST00000456064 1369 ntBASIC19.03■□□□□ 0.64
CTDP1Q9Y5B0 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTDP1Q9Y5B0 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.03■□□□□ 0.64
CTDP1Q9Y5B0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTDP1Q9Y5B0 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CTDP1Q9Y5B0 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.02■□□□□ 0.64
CTDP1Q9Y5B0 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CTDP1Q9Y5B0 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CTDP1Q9Y5B0 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTDP1Q9Y5B0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.02■□□□□ 0.64
CTDP1Q9Y5B0 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTDP1Q9Y5B0 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
CTDP1Q9Y5B0 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTDP1Q9Y5B0 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTDP1Q9Y5B0 FAM220BP-201ENST00000377689 816 ntBASIC19.02■□□□□ 0.64
CTDP1Q9Y5B0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.02■□□□□ 0.64
CTDP1Q9Y5B0 AC092580.3-201ENST00000430932 139 ntBASIC19.02■□□□□ 0.64
CTDP1Q9Y5B0 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.02■□□□□ 0.64
CTDP1Q9Y5B0 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CTDP1Q9Y5B0 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.02■□□□□ 0.64
CTDP1Q9Y5B0 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.02■□□□□ 0.64
CTDP1Q9Y5B0 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.02■□□□□ 0.64
CTDP1Q9Y5B0 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.02■□□□□ 0.64
CTDP1Q9Y5B0 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.02■□□□□ 0.64
CTDP1Q9Y5B0 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTDP1Q9Y5B0 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.02■□□□□ 0.64
CTDP1Q9Y5B0 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTDP1Q9Y5B0 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTDP1Q9Y5B0 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTDP1Q9Y5B0 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.02■□□□□ 0.64
CTDP1Q9Y5B0 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CTDP1Q9Y5B0 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTDP1Q9Y5B0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTDP1Q9Y5B0 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CTDP1Q9Y5B0 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CTDP1Q9Y5B0 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.02■□□□□ 0.63
CTDP1Q9Y5B0 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms