Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDHGC3Q9UN70 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDHGC3Q9UN70 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PCDHGC3Q9UN70 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.38■□□□□ 0.37
PCDHGC3Q9UN70 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
PCDHGC3Q9UN70 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDHGC3Q9UN70 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGC3Q9UN70 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGC3Q9UN70 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHGC3Q9UN70 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGC3Q9UN70 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGC3Q9UN70 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 AL589702.1-201ENST00000641229 1509 ntBASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 HTR5BP-201ENST00000430851 1154 ntBASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 ALG1L5P-201ENST00000482043 771 ntBASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 AC243562.1-201ENST00000560672 389 ntBASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 AL138918.1-201ENST00000568306 659 ntBASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PCDHGC3Q9UN70 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGC3Q9UN70 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGC3Q9UN70 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
PCDHGC3Q9UN70 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGC3Q9UN70 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGC3Q9UN70 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGC3Q9UN70 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGC3Q9UN70 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PCDHGC3Q9UN70 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGC3Q9UN70 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGC3Q9UN70 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGC3Q9UN70 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGC3Q9UN70 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGC3Q9UN70 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PCDHGC3Q9UN70 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGC3Q9UN70 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGC3Q9UN70 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDHGC3Q9UN70 DNAJB3-201ENST00000446806 729 ntBASIC17.36■□□□□ 0.37
PCDHGC3Q9UN70 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGC3Q9UN70 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.36■□□□□ 0.37
PCDHGC3Q9UN70 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHGC3Q9UN70 AC026120.1-201ENST00000611536 926 ntBASIC17.36■□□□□ 0.37
PCDHGC3Q9UN70 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PCDHGC3Q9UN70 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.36■□□□□ 0.37
PCDHGC3Q9UN70 AC008267.7-201ENST00000624570 1194 ntBASIC17.36■□□□□ 0.37
PCDHGC3Q9UN70 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHGC3Q9UN70 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHGC3Q9UN70 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PCDHGC3Q9UN70 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGC3Q9UN70 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGC3Q9UN70 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGC3Q9UN70 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGC3Q9UN70 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGC3Q9UN70 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PCDHGC3Q9UN70 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGC3Q9UN70 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGC3Q9UN70 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGC3Q9UN70 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHGC3Q9UN70 PKD1P1-201ENST00000458669 6805 ntBASIC17.35■□□□□ 0.37
PCDHGC3Q9UN70 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGC3Q9UN70 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGC3Q9UN70 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGC3Q9UN70 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGC3Q9UN70 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGC3Q9UN70 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms