Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ECHDC1Q9NTX5 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ECHDC1Q9NTX5 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ECHDC1Q9NTX5 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ECHDC1Q9NTX5 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ECHDC1Q9NTX5 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ECHDC1Q9NTX5 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ECHDC1Q9NTX5 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
ECHDC1Q9NTX5 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC20.07■□□□□ 0.8
ECHDC1Q9NTX5 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC20.06■□□□□ 0.8
ECHDC1Q9NTX5 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ECHDC1Q9NTX5 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ECHDC1Q9NTX5 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ECHDC1Q9NTX5 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ECHDC1Q9NTX5 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ECHDC1Q9NTX5 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.06■□□□□ 0.8
ECHDC1Q9NTX5 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ECHDC1Q9NTX5 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ECHDC1Q9NTX5 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ECHDC1Q9NTX5 AC211486.1-202ENST00000416371 468 ntBASIC20.06■□□□□ 0.8
ECHDC1Q9NTX5 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC20.06■□□□□ 0.8
ECHDC1Q9NTX5 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.06■□□□□ 0.8
ECHDC1Q9NTX5 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.06■□□□□ 0.8
ECHDC1Q9NTX5 AC211476.1-201ENST00000503899 468 ntBASIC20.06■□□□□ 0.8
ECHDC1Q9NTX5 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ECHDC1Q9NTX5 AC105233.2-201ENST00000523697 349 ntBASIC20.06■□□□□ 0.8
ECHDC1Q9NTX5 AF228730.5-201ENST00000530288 346 ntBASIC20.06■□□□□ 0.8
ECHDC1Q9NTX5 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC20.06■□□□□ 0.8
ECHDC1Q9NTX5 NKG7-205ENST00000600427 520 ntTSL 3 BASIC20.06■□□□□ 0.8
ECHDC1Q9NTX5 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ECHDC1Q9NTX5 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ECHDC1Q9NTX5 U82695.1-201ENST00000635752 1889 ntBASIC20.06■□□□□ 0.8
ECHDC1Q9NTX5 MTHFR-217ENST00000641820 1569 ntBASIC20.06■□□□□ 0.8
ECHDC1Q9NTX5 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ECHDC1Q9NTX5 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ECHDC1Q9NTX5 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ECHDC1Q9NTX5 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ECHDC1Q9NTX5 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ECHDC1Q9NTX5 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ECHDC1Q9NTX5 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ECHDC1Q9NTX5 FOXO1B-201ENST00000504678 1527 ntBASIC20.06■□□□□ 0.8
ECHDC1Q9NTX5 AL592424.1-201ENST00000563624 1536 ntBASIC20.06■□□□□ 0.8
ECHDC1Q9NTX5 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 CYP2T1P-202ENST00000641596 2535 ntBASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 MIR346-201ENST00000362234 95 ntBASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 AL592309.1-201ENST00000443127 649 ntBASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 AC069335.1-201ENST00000489972 472 ntBASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 KRT8P23-201ENST00000560090 1207 ntBASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC20.05■□□□□ 0.8
ECHDC1Q9NTX5 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 AC006449.6-201ENST00000612330 2296 ntBASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 AL589702.1-201ENST00000641229 1509 ntBASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 AC004461.1-201ENST00000412461 403 ntBASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms