Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRDM9Q9NQV7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 MTHFR-217ENST00000641820 1569 ntBASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 WASH6P-202ENST00000359512 1437 ntBASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 AL691403.2-201ENST00000618460 490 ntBASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 AC134684.3-201ENST00000641758 218 ntBASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 AC079781.4-201ENST00000641908 219 ntBASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 AKAP8P1-201ENST00000434743 1349 ntBASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRDM9Q9NQV7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 AC010740.1-201ENST00000417035 684 ntBASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 ADH5P3-201ENST00000433842 1137 ntBASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 RN7SL589P-201ENST00000481268 310 ntBASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRDM9Q9NQV7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
PRDM9Q9NQV7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRDM9Q9NQV7 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRDM9Q9NQV7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PRDM9Q9NQV7 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PRDM9Q9NQV7 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PRDM9Q9NQV7 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRDM9Q9NQV7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms