Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.43■□□□□ 0.7
RNF41Q9H4P4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF41Q9H4P4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF41Q9H4P4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF41Q9H4P4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF41Q9H4P4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RNF41Q9H4P4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF41Q9H4P4 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF41Q9H4P4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.41■□□□□ 0.7
RNF41Q9H4P4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF41Q9H4P4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF41Q9H4P4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF41Q9H4P4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.41■□□□□ 0.7
RNF41Q9H4P4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
RNF41Q9H4P4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF41Q9H4P4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF41Q9H4P4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF41Q9H4P4 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF41Q9H4P4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
RNF41Q9H4P4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.41■□□□□ 0.7
RNF41Q9H4P4 FAM58DP-201ENST00000428076 619 ntBASIC19.41■□□□□ 0.7
RNF41Q9H4P4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.41■□□□□ 0.7
RNF41Q9H4P4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.41■□□□□ 0.7
RNF41Q9H4P4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF41Q9H4P4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RNF41Q9H4P4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.41■□□□□ 0.7
RNF41Q9H4P4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RNF41Q9H4P4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF41Q9H4P4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF41Q9H4P4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
RNF41Q9H4P4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF41Q9H4P4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RNF41Q9H4P4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF41Q9H4P4 FOXO1B-201ENST00000504678 1527 ntBASIC19.41■□□□□ 0.7
RNF41Q9H4P4 AL589702.1-201ENST00000641229 1509 ntBASIC19.41■□□□□ 0.7
RNF41Q9H4P4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF41Q9H4P4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF41Q9H4P4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF41Q9H4P4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.4■□□□□ 0.7
RNF41Q9H4P4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RNF41Q9H4P4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RNF41Q9H4P4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF41Q9H4P4 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.4■□□□□ 0.7
RNF41Q9H4P4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.4■□□□□ 0.7
RNF41Q9H4P4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF41Q9H4P4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF41Q9H4P4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RNF41Q9H4P4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF41Q9H4P4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.4■□□□□ 0.7
RNF41Q9H4P4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF41Q9H4P4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF41Q9H4P4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
RNF41Q9H4P4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.4■□□□□ 0.7
RNF41Q9H4P4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.4■□□□□ 0.7
RNF41Q9H4P4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.4■□□□□ 0.7
RNF41Q9H4P4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.4■□□□□ 0.7
RNF41Q9H4P4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.4■□□□□ 0.7
RNF41Q9H4P4 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF41Q9H4P4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF41Q9H4P4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF41Q9H4P4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms