Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.24■□□□□ 0.03
TRIM2Q9C040 LINC01144-201ENST00000626198 1710 ntBASIC15.24■□□□□ 0.03
TRIM2Q9C040 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRIM2Q9C040 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM2Q9C040 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.24■□□□□ 0.03
TRIM2Q9C040 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM2Q9C040 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.24■□□□□ 0.03
TRIM2Q9C040 RPL13AP23-201ENST00000480739 586 ntBASIC15.24■□□□□ 0.03
TRIM2Q9C040 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.24■□□□□ 0.03
TRIM2Q9C040 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.24■□□□□ 0.03
TRIM2Q9C040 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.24■□□□□ 0.03
TRIM2Q9C040 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM2Q9C040 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.24■□□□□ 0.03
TRIM2Q9C040 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.24■□□□□ 0.03
TRIM2Q9C040 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.24■□□□□ 0.03
TRIM2Q9C040 AC012640.2-201ENST00000561606 901 ntBASIC15.24■□□□□ 0.03
TRIM2Q9C040 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.24■□□□□ 0.03
TRIM2Q9C040 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.24■□□□□ 0.03
TRIM2Q9C040 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.24■□□□□ 0.03
TRIM2Q9C040 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRIM2Q9C040 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM2Q9C040 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRIM2Q9C040 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TRIM2Q9C040 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM2Q9C040 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.24■□□□□ 0.03
TRIM2Q9C040 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM2Q9C040 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.24■□□□□ 0.03
TRIM2Q9C040 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM2Q9C040 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM2Q9C040 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM2Q9C040 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRIM2Q9C040 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.24■□□□□ 0.03
TRIM2Q9C040 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM2Q9C040 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM2Q9C040 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM2Q9C040 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.23■□□□□ 0.03
TRIM2Q9C040 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM2Q9C040 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM2Q9C040 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM2Q9C040 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM2Q9C040 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
TRIM2Q9C040 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM2Q9C040 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM2Q9C040 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM2Q9C040 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM2Q9C040 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM2Q9C040 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.23■□□□□ 0.03
TRIM2Q9C040 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TRIM2Q9C040 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM2Q9C040 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM2Q9C040 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM2Q9C040 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.23■□□□□ 0.03
TRIM2Q9C040 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM2Q9C040 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TRIM2Q9C040 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.23■□□□□ 0.03
TRIM2Q9C040 AC108073.2-201ENST00000464002 357 ntBASIC15.23■□□□□ 0.03
TRIM2Q9C040 POU5F1P6-201ENST00000466990 990 ntBASIC15.23■□□□□ 0.03
TRIM2Q9C040 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.23■□□□□ 0.03
TRIM2Q9C040 KRT18P58-201ENST00000527480 1120 ntBASIC15.23■□□□□ 0.03
TRIM2Q9C040 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.23■□□□□ 0.03
TRIM2Q9C040 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TRIM2Q9C040 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.23■□□□□ 0.03
TRIM2Q9C040 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TRIM2Q9C040 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM2Q9C040 AC020765.3-201ENST00000613051 740 ntBASIC15.23■□□□□ 0.03
TRIM2Q9C040 AC010654.1-201ENST00000615722 808 ntBASIC15.23■□□□□ 0.03
TRIM2Q9C040 AC004790.2-201ENST00000623588 572 ntBASIC15.23■□□□□ 0.03
TRIM2Q9C040 AC117500.6-201ENST00000624871 588 ntBASIC15.23■□□□□ 0.03
TRIM2Q9C040 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM2Q9C040 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.23■□□□□ 0.03
TRIM2Q9C040 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM2Q9C040 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.23■□□□□ 0.03
TRIM2Q9C040 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM2Q9C040 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM2Q9C040 PCGF3-213ENST00000620529 1899 ntBASIC15.23■□□□□ 0.03
TRIM2Q9C040 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TRIM2Q9C040 AC012569.1-201ENST00000591191 1524 ntBASIC15.22■□□□□ 0.03
TRIM2Q9C040 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRIM2Q9C040 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.22■□□□□ 0.03
TRIM2Q9C040 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRIM2Q9C040 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.22■□□□□ 0.03
TRIM2Q9C040 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM2Q9C040 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM2Q9C040 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
TRIM2Q9C040 AC005052.1-201ENST00000625181 2492 ntBASIC15.22■□□□□ 0.03
TRIM2Q9C040 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRIM2Q9C040 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM2Q9C040 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRIM2Q9C040 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TRIM2Q9C040 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM2Q9C040 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TRIM2Q9C040 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.22■□□□□ 0.03
TRIM2Q9C040 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TRIM2Q9C040 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM2Q9C040 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.22■□□□□ 0.03
TRIM2Q9C040 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.22■□□□□ 0.03
TRIM2Q9C040 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRIM2Q9C040 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.22■□□□□ 0.03
TRIM2Q9C040 FAM185BP-201ENST00000443595 716 ntBASIC15.22■□□□□ 0.03
TRIM2Q9C040 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms