Protein–RNA interactions for Protein: Q96MD7

C9orf85, Uncharacterized protein C9orf85, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85Q96MD7 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
C9orf85Q96MD7 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 SUPT20HL2-201ENST00000486479 2409 ntBASIC11.99□□□□□ -0.49
C9orf85Q96MD7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 IGHV3-65-201ENST00000523210 341 ntBASIC11.99□□□□□ -0.49
C9orf85Q96MD7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 AF238378.1-201ENST00000526806 358 ntBASIC11.99□□□□□ -0.49
C9orf85Q96MD7 OR7E14P-202ENST00000530490 1290 ntBASIC11.99□□□□□ -0.49
C9orf85Q96MD7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 HLA-DQB2-231ENST00000435145 2026 ntBASIC11.99□□□□□ -0.49
C9orf85Q96MD7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC11.99□□□□□ -0.49
C9orf85Q96MD7 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 LINC02447-202ENST00000501888 2146 ntBASIC11.98□□□□□ -0.49
C9orf85Q96MD7 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 DUSP5P1-201ENST00000441325 1139 ntBASIC11.98□□□□□ -0.49
C9orf85Q96MD7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
C9orf85Q96MD7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms