Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
ALPK3Q96L96 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALPK3Q96L96 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALPK3Q96L96 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.65■□□□□ 0.42
ALPK3Q96L96 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALPK3Q96L96 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ALPK3Q96L96 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALPK3Q96L96 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ALPK3Q96L96 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
ALPK3Q96L96 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.64■□□□□ 0.42
ALPK3Q96L96 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.64■□□□□ 0.42
ALPK3Q96L96 AC093433.1-201ENST00000458048 571 ntBASIC17.64■□□□□ 0.42
ALPK3Q96L96 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC17.64■□□□□ 0.42
ALPK3Q96L96 AC022137.2-201ENST00000503482 481 ntBASIC17.64■□□□□ 0.42
ALPK3Q96L96 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.64■□□□□ 0.42
ALPK3Q96L96 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC17.64■□□□□ 0.42
ALPK3Q96L96 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.64■□□□□ 0.42
ALPK3Q96L96 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.64■□□□□ 0.42
ALPK3Q96L96 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
ALPK3Q96L96 MIR3619-201ENST00000579667 83 ntBASIC17.64■□□□□ 0.42
ALPK3Q96L96 CLUHP6-201ENST00000580789 941 ntBASIC17.64■□□□□ 0.42
ALPK3Q96L96 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
ALPK3Q96L96 AC008687.7-202ENST00000637404 953 ntBASIC17.64■□□□□ 0.42
ALPK3Q96L96 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
ALPK3Q96L96 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.64■□□□□ 0.41
ALPK3Q96L96 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ALPK3Q96L96 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ALPK3Q96L96 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.64■□□□□ 0.41
ALPK3Q96L96 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ALPK3Q96L96 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ALPK3Q96L96 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.64■□□□□ 0.41
ALPK3Q96L96 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.64■□□□□ 0.41
ALPK3Q96L96 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ALPK3Q96L96 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ALPK3Q96L96 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ALPK3Q96L96 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ALPK3Q96L96 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.64■□□□□ 0.41
ALPK3Q96L96 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.64■□□□□ 0.41
ALPK3Q96L96 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ALPK3Q96L96 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
ALPK3Q96L96 AL591846.1-201ENST00000451736 433 ntBASIC17.64■□□□□ 0.41
ALPK3Q96L96 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
ALPK3Q96L96 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.64■□□□□ 0.41
ALPK3Q96L96 AP001258.2-201ENST00000529891 490 ntBASIC17.64■□□□□ 0.41
ALPK3Q96L96 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.64■□□□□ 0.41
ALPK3Q96L96 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ALPK3Q96L96 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ALPK3Q96L96 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.64■□□□□ 0.41
ALPK3Q96L96 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ALPK3Q96L96 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.64■□□□□ 0.41
ALPK3Q96L96 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ALPK3Q96L96 AC134312.5-201ENST00000568031 1313 ntBASIC17.64■□□□□ 0.41
ALPK3Q96L96 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.64■□□□□ 0.41
ALPK3Q96L96 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ALPK3Q96L96 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.63■□□□□ 0.41
ALPK3Q96L96 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ALPK3Q96L96 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.63■□□□□ 0.41
ALPK3Q96L96 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ALPK3Q96L96 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ALPK3Q96L96 TOMM22P5-201ENST00000416399 439 ntBASIC17.63■□□□□ 0.41
ALPK3Q96L96 TARDBPP1-201ENST00000442013 1203 ntBASIC17.63■□□□□ 0.41
ALPK3Q96L96 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC17.63■□□□□ 0.41
ALPK3Q96L96 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC17.63■□□□□ 0.41
ALPK3Q96L96 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.63■□□□□ 0.41
ALPK3Q96L96 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.63■□□□□ 0.41
ALPK3Q96L96 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.63■□□□□ 0.41
ALPK3Q96L96 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ALPK3Q96L96 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ALPK3Q96L96 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.63■□□□□ 0.41
ALPK3Q96L96 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC17.63■□□□□ 0.41
ALPK3Q96L96 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ALPK3Q96L96 AC092978.1-202ENST00000637590 1327 ntBASIC17.63■□□□□ 0.41
ALPK3Q96L96 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ALPK3Q96L96 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ALPK3Q96L96 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ALPK3Q96L96 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ALPK3Q96L96 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ALPK3Q96L96 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ALPK3Q96L96 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ALPK3Q96L96 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ALPK3Q96L96 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ALPK3Q96L96 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ALPK3Q96L96 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ALPK3Q96L96 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ALPK3Q96L96 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ALPK3Q96L96 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
ALPK3Q96L96 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC17.62■□□□□ 0.41
ALPK3Q96L96 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.62■□□□□ 0.41
ALPK3Q96L96 AP006547.1-201ENST00000563435 692 ntBASIC17.62■□□□□ 0.41
ALPK3Q96L96 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.62■□□□□ 0.41
ALPK3Q96L96 AC138627.1-207ENST00000641560 1006 ntBASIC17.62■□□□□ 0.41
ALPK3Q96L96 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.62■□□□□ 0.41
ALPK3Q96L96 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ALPK3Q96L96 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ALPK3Q96L96 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ALPK3Q96L96 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ALPK3Q96L96 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ALPK3Q96L96 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.62■□□□□ 0.41
ALPK3Q96L96 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.62■□□□□ 0.41
ALPK3Q96L96 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms