Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PGBD1Q96JS3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.18■□□□□ 0.66
PGBD1Q96JS3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PGBD1Q96JS3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PGBD1Q96JS3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PGBD1Q96JS3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PGBD1Q96JS3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.18■□□□□ 0.66
PGBD1Q96JS3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.18■□□□□ 0.66
PGBD1Q96JS3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PGBD1Q96JS3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
PGBD1Q96JS3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PGBD1Q96JS3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PGBD1Q96JS3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PGBD1Q96JS3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.18■□□□□ 0.66
PGBD1Q96JS3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD1Q96JS3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD1Q96JS3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD1Q96JS3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD1Q96JS3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD1Q96JS3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.17■□□□□ 0.66
PGBD1Q96JS3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD1Q96JS3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.17■□□□□ 0.66
PGBD1Q96JS3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PGBD1Q96JS3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD1Q96JS3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD1Q96JS3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD1Q96JS3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD1Q96JS3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD1Q96JS3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC19.17■□□□□ 0.66
PGBD1Q96JS3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PGBD1Q96JS3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD1Q96JS3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
PGBD1Q96JS3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD1Q96JS3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD1Q96JS3 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD1Q96JS3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
PGBD1Q96JS3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD1Q96JS3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.17■□□□□ 0.66
PGBD1Q96JS3 HTR5BP-201ENST00000430851 1154 ntBASIC19.17■□□□□ 0.66
PGBD1Q96JS3 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.17■□□□□ 0.66
PGBD1Q96JS3 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.17■□□□□ 0.66
PGBD1Q96JS3 MIR4469-201ENST00000583919 79 ntBASIC19.17■□□□□ 0.66
PGBD1Q96JS3 AC006538.3-201ENST00000612495 578 ntBASIC19.17■□□□□ 0.66
PGBD1Q96JS3 C20orf181-201ENST00000623918 480 ntBASIC19.17■□□□□ 0.66
PGBD1Q96JS3 AC092902.6-201ENST00000641783 218 ntBASIC19.17■□□□□ 0.66
PGBD1Q96JS3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD1Q96JS3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD1Q96JS3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD1Q96JS3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD1Q96JS3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD1Q96JS3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC19.17■□□□□ 0.66
PGBD1Q96JS3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.17■□□□□ 0.66
PGBD1Q96JS3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD1Q96JS3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD1Q96JS3 GGT4P-201ENST00000623672 1708 ntBASIC19.17■□□□□ 0.66
PGBD1Q96JS3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD1Q96JS3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC19.16■□□□□ 0.66
PGBD1Q96JS3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD1Q96JS3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.16■□□□□ 0.66
PGBD1Q96JS3 AC105917.1-201ENST00000506637 2539 ntBASIC19.16■□□□□ 0.66
PGBD1Q96JS3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD1Q96JS3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD1Q96JS3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
PGBD1Q96JS3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD1Q96JS3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD1Q96JS3 AL596087.1-201ENST00000400979 1969 ntBASIC19.16■□□□□ 0.66
PGBD1Q96JS3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PGBD1Q96JS3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD1Q96JS3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD1Q96JS3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.16■□□□□ 0.66
PGBD1Q96JS3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.16■□□□□ 0.66
PGBD1Q96JS3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.16■□□□□ 0.66
PGBD1Q96JS3 MIR3687-2-201ENST00000577708 61 ntBASIC19.16■□□□□ 0.66
PGBD1Q96JS3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.16■□□□□ 0.66
PGBD1Q96JS3 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.16■□□□□ 0.66
PGBD1Q96JS3 MIR3687-1-201ENST00000614492 61 ntBASIC19.16■□□□□ 0.66
PGBD1Q96JS3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PGBD1Q96JS3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD1Q96JS3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD1Q96JS3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD1Q96JS3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.16■□□□□ 0.66
PGBD1Q96JS3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD1Q96JS3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.16■□□□□ 0.66
PGBD1Q96JS3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD1Q96JS3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD1Q96JS3 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.16■□□□□ 0.66
PGBD1Q96JS3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD1Q96JS3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD1Q96JS3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD1Q96JS3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PGBD1Q96JS3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD1Q96JS3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PGBD1Q96JS3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.15■□□□□ 0.66
PGBD1Q96JS3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD1Q96JS3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD1Q96JS3 AL031731.1-201ENST00000642131 2094 ntBASIC19.15■□□□□ 0.66
PGBD1Q96JS3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD1Q96JS3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD1Q96JS3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.15■□□□□ 0.66
PGBD1Q96JS3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms