Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE4Q96A23 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.86□□□□□ -0.03
CPNE4Q96A23 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE4Q96A23 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE4Q96A23 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.86□□□□□ -0.03
CPNE4Q96A23 AC016027.1-202ENST00000607927 1699 ntBASIC14.86□□□□□ -0.03
CPNE4Q96A23 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE4Q96A23 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.86□□□□□ -0.03
CPNE4Q96A23 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE4Q96A23 AL512652.2-201ENST00000625156 1716 ntBASIC14.86□□□□□ -0.03
CPNE4Q96A23 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CPNE4Q96A23 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.86□□□□□ -0.03
CPNE4Q96A23 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CPNE4Q96A23 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE4Q96A23 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE4Q96A23 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE4Q96A23 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE4Q96A23 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE4Q96A23 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CPNE4Q96A23 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE4Q96A23 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE4Q96A23 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE4Q96A23 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
CPNE4Q96A23 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE4Q96A23 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE4Q96A23 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE4Q96A23 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE4Q96A23 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE4Q96A23 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE4Q96A23 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE4Q96A23 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE4Q96A23 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE4Q96A23 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE4Q96A23 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.85□□□□□ -0.03
CPNE4Q96A23 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE4Q96A23 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.85□□□□□ -0.03
CPNE4Q96A23 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.85□□□□□ -0.03
CPNE4Q96A23 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
CPNE4Q96A23 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
CPNE4Q96A23 TIMM8BP1-201ENST00000452384 211 ntBASIC14.85□□□□□ -0.03
CPNE4Q96A23 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.85□□□□□ -0.03
CPNE4Q96A23 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.85□□□□□ -0.03
CPNE4Q96A23 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE4Q96A23 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CPNE4Q96A23 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CPNE4Q96A23 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
CPNE4Q96A23 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE4Q96A23 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.85□□□□□ -0.03
CPNE4Q96A23 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE4Q96A23 AC055717.3-201ENST00000622967 595 ntBASIC14.85□□□□□ -0.03
CPNE4Q96A23 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.85□□□□□ -0.03
CPNE4Q96A23 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE4Q96A23 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.85□□□□□ -0.03
CPNE4Q96A23 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
CPNE4Q96A23 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
CPNE4Q96A23 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE4Q96A23 RNF216P1-203ENST00000404404 2427 ntBASIC14.85□□□□□ -0.03
CPNE4Q96A23 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE4Q96A23 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE4Q96A23 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CPNE4Q96A23 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CPNE4Q96A23 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE4Q96A23 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.85□□□□□ -0.03
CPNE4Q96A23 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE4Q96A23 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE4Q96A23 AC106886.4-201ENST00000623557 2502 ntBASIC14.85□□□□□ -0.03
CPNE4Q96A23 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE4Q96A23 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE4Q96A23 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE4Q96A23 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE4Q96A23 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE4Q96A23 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CPNE4Q96A23 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE4Q96A23 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.84□□□□□ -0.03
CPNE4Q96A23 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE4Q96A23 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.84□□□□□ -0.03
CPNE4Q96A23 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE4Q96A23 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE4Q96A23 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE4Q96A23 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE4Q96A23 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.84□□□□□ -0.03
CPNE4Q96A23 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.84□□□□□ -0.03
CPNE4Q96A23 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.84□□□□□ -0.03
CPNE4Q96A23 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.84□□□□□ -0.03
CPNE4Q96A23 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.84□□□□□ -0.03
CPNE4Q96A23 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.84□□□□□ -0.03
CPNE4Q96A23 SNHG9-202ENST00000564014 471 ntBASIC14.84□□□□□ -0.03
CPNE4Q96A23 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.84□□□□□ -0.03
CPNE4Q96A23 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.84□□□□□ -0.03
CPNE4Q96A23 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.84□□□□□ -0.03
CPNE4Q96A23 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.84□□□□□ -0.03
CPNE4Q96A23 AC105339.1-204ENST00000636249 355 ntBASIC14.84□□□□□ -0.03
CPNE4Q96A23 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
CPNE4Q96A23 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
CPNE4Q96A23 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE4Q96A23 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.84□□□□□ -0.03
CPNE4Q96A23 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
CPNE4Q96A23 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE4Q96A23 HLA-A-202ENST00000376806 1854 ntBASIC14.84□□□□□ -0.03
CPNE4Q96A23 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms