Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CASKIN1Q8WXD9 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC25.25■■□□□ 1.63
CASKIN1Q8WXD9 TMEM14DP-201ENST00000422205 345 ntBASIC25.25■■□□□ 1.63
CASKIN1Q8WXD9 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC25.25■■□□□ 1.63
CASKIN1Q8WXD9 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC25.25■■□□□ 1.63
CASKIN1Q8WXD9 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC25.25■■□□□ 1.63
CASKIN1Q8WXD9 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC25.25■■□□□ 1.63
CASKIN1Q8WXD9 HILS1-202ENST00000545329 423 ntBASIC25.25■■□□□ 1.63
CASKIN1Q8WXD9 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC25.25■■□□□ 1.63
CASKIN1Q8WXD9 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CASKIN1Q8WXD9 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC25.25■■□□□ 1.63
CASKIN1Q8WXD9 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CASKIN1Q8WXD9 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC25.25■■□□□ 1.63
CASKIN1Q8WXD9 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC25.25■■□□□ 1.63
CASKIN1Q8WXD9 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
CASKIN1Q8WXD9 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
CASKIN1Q8WXD9 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC25.24■■□□□ 1.63
CASKIN1Q8WXD9 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC25.24■■□□□ 1.63
CASKIN1Q8WXD9 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
CASKIN1Q8WXD9 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC25.24■■□□□ 1.63
CASKIN1Q8WXD9 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
CASKIN1Q8WXD9 KRT8P37-201ENST00000451609 1420 ntBASIC25.24■■□□□ 1.63
CASKIN1Q8WXD9 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CASKIN1Q8WXD9 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC25.24■■□□□ 1.63
CASKIN1Q8WXD9 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC25.24■■□□□ 1.63
CASKIN1Q8WXD9 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC25.24■■□□□ 1.63
CASKIN1Q8WXD9 MYCLP2-201ENST00000449268 967 ntBASIC25.24■■□□□ 1.63
CASKIN1Q8WXD9 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CASKIN1Q8WXD9 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC25.24■■□□□ 1.63
CASKIN1Q8WXD9 RN7SL752P-201ENST00000463779 287 ntBASIC25.24■■□□□ 1.63
CASKIN1Q8WXD9 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC25.24■■□□□ 1.63
CASKIN1Q8WXD9 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC25.24■■□□□ 1.63
CASKIN1Q8WXD9 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC25.24■■□□□ 1.63
CASKIN1Q8WXD9 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC25.24■■□□□ 1.63
CASKIN1Q8WXD9 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC25.24■■□□□ 1.63
CASKIN1Q8WXD9 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
CASKIN1Q8WXD9 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC25.24■■□□□ 1.63
CASKIN1Q8WXD9 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC25.24■■□□□ 1.63
CASKIN1Q8WXD9 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CASKIN1Q8WXD9 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
CASKIN1Q8WXD9 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CASKIN1Q8WXD9 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC25.24■■□□□ 1.63
CASKIN1Q8WXD9 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CASKIN1Q8WXD9 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC25.24■■□□□ 1.63
CASKIN1Q8WXD9 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CASKIN1Q8WXD9 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC25.23■■□□□ 1.63
CASKIN1Q8WXD9 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
CASKIN1Q8WXD9 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CASKIN1Q8WXD9 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CASKIN1Q8WXD9 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CASKIN1Q8WXD9 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC25.23■■□□□ 1.63
CASKIN1Q8WXD9 ATP5G2P4-201ENST00000442175 420 ntBASIC25.23■■□□□ 1.63
CASKIN1Q8WXD9 GPR53P-205ENST00000457298 1084 ntBASIC25.23■■□□□ 1.63
CASKIN1Q8WXD9 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC25.23■■□□□ 1.63
CASKIN1Q8WXD9 RARRES2P5-201ENST00000564013 466 ntBASIC25.23■■□□□ 1.63
CASKIN1Q8WXD9 AC106886.1-201ENST00000568660 600 ntBASIC25.23■■□□□ 1.63
CASKIN1Q8WXD9 WFDC1-204ENST00000613603 549 ntBASIC25.23■■□□□ 1.63
CASKIN1Q8WXD9 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC25.23■■□□□ 1.63
CASKIN1Q8WXD9 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CASKIN1Q8WXD9 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CASKIN1Q8WXD9 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CASKIN1Q8WXD9 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
CASKIN1Q8WXD9 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CASKIN1Q8WXD9 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CASKIN1Q8WXD9 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC25.22■■□□□ 1.63
CASKIN1Q8WXD9 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC25.22■■□□□ 1.63
CASKIN1Q8WXD9 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
CASKIN1Q8WXD9 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC25.22■■□□□ 1.63
CASKIN1Q8WXD9 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CASKIN1Q8WXD9 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC25.22■■□□□ 1.63
CASKIN1Q8WXD9 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC25.22■■□□□ 1.63
CASKIN1Q8WXD9 AC243562.2-201ENST00000561247 970 ntBASIC25.22■■□□□ 1.63
CASKIN1Q8WXD9 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
CASKIN1Q8WXD9 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
CASKIN1Q8WXD9 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
CASKIN1Q8WXD9 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC25.22■■□□□ 1.63
CASKIN1Q8WXD9 NF2-208ENST00000403435 2568 ntTSL 5 BASIC25.22■■□□□ 1.63
CASKIN1Q8WXD9 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC25.22■■□□□ 1.63
CASKIN1Q8WXD9 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
CASKIN1Q8WXD9 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC25.22■■□□□ 1.63
CASKIN1Q8WXD9 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC25.22■■□□□ 1.63
CASKIN1Q8WXD9 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
CASKIN1Q8WXD9 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
CASKIN1Q8WXD9 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC25.21■■□□□ 1.63
CASKIN1Q8WXD9 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC25.21■■□□□ 1.63
CASKIN1Q8WXD9 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC25.21■■□□□ 1.63
CASKIN1Q8WXD9 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC25.21■■□□□ 1.63
CASKIN1Q8WXD9 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CASKIN1Q8WXD9 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC25.21■■□□□ 1.63
CASKIN1Q8WXD9 AC009053.2-201ENST00000563701 2365 ntBASIC25.21■■□□□ 1.63
CASKIN1Q8WXD9 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CASKIN1Q8WXD9 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC25.21■■□□□ 1.63
CASKIN1Q8WXD9 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CASKIN1Q8WXD9 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CASKIN1Q8WXD9 REXO1L8P-201ENST00000604378 1897 ntBASIC25.21■■□□□ 1.63
CASKIN1Q8WXD9 EML3-212ENST00000494176 2901 ntTSL 2 BASIC25.21■■□□□ 1.63
CASKIN1Q8WXD9 EML3-216ENST00000529309 2909 ntTSL 2 BASIC25.21■■□□□ 1.63
CASKIN1Q8WXD9 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC25.21■■□□□ 1.63
CASKIN1Q8WXD9 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CASKIN1Q8WXD9 FADS2-205ENST00000517839 469 ntTSL 3 BASIC25.2■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms