Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC19.8■□□□□ 0.76
SNED1Q8TER0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNED1Q8TER0 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNED1Q8TER0 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SNED1Q8TER0 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNED1Q8TER0 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SNED1Q8TER0 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC19.8■□□□□ 0.76
SNED1Q8TER0 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SNED1Q8TER0 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC19.8■□□□□ 0.76
SNED1Q8TER0 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC19.8■□□□□ 0.76
SNED1Q8TER0 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC19.8■□□□□ 0.76
SNED1Q8TER0 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC19.8■□□□□ 0.76
SNED1Q8TER0 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC19.8■□□□□ 0.76
SNED1Q8TER0 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC19.8■□□□□ 0.76
SNED1Q8TER0 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SNED1Q8TER0 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SNED1Q8TER0 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNED1Q8TER0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SNED1Q8TER0 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNED1Q8TER0 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SNED1Q8TER0 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC19.8■□□□□ 0.76
SNED1Q8TER0 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC19.8■□□□□ 0.76
SNED1Q8TER0 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SNED1Q8TER0 TUBB1P2-201ENST00000422712 1306 ntBASIC19.79■□□□□ 0.76
SNED1Q8TER0 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC19.79■□□□□ 0.76
SNED1Q8TER0 TUBB1P1-201ENST00000503144 1300 ntBASIC19.79■□□□□ 0.76
SNED1Q8TER0 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNED1Q8TER0 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNED1Q8TER0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.79■□□□□ 0.76
SNED1Q8TER0 AC005332.8-201ENST00000622750 2735 ntBASIC19.79■□□□□ 0.76
SNED1Q8TER0 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.79■□□□□ 0.76
SNED1Q8TER0 AL391256.1-201ENST00000443260 1855 ntBASIC19.79■□□□□ 0.76
SNED1Q8TER0 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
SNED1Q8TER0 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNED1Q8TER0 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SNED1Q8TER0 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
SNED1Q8TER0 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC19.79■□□□□ 0.76
SNED1Q8TER0 AL442647.2-201ENST00000429864 857 ntBASIC19.79■□□□□ 0.76
SNED1Q8TER0 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SNED1Q8TER0 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC19.79■□□□□ 0.76
SNED1Q8TER0 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.79■□□□□ 0.76
SNED1Q8TER0 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC19.79■□□□□ 0.76
SNED1Q8TER0 ABBA01031660.1-201ENST00000635219 756 ntBASIC19.79■□□□□ 0.76
SNED1Q8TER0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SNED1Q8TER0 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC19.79■□□□□ 0.76
SNED1Q8TER0 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SNED1Q8TER0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNED1Q8TER0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNED1Q8TER0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SNED1Q8TER0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNED1Q8TER0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SNED1Q8TER0 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNED1Q8TER0 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNED1Q8TER0 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.79■□□□□ 0.76
SNED1Q8TER0 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNED1Q8TER0 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.78■□□□□ 0.76
SNED1Q8TER0 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.78■□□□□ 0.76
SNED1Q8TER0 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.78■□□□□ 0.76
SNED1Q8TER0 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SNED1Q8TER0 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNED1Q8TER0 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNED1Q8TER0 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNED1Q8TER0 STX1A-203ENST00000395155 783 ntTSL 2 BASIC19.78■□□□□ 0.76
SNED1Q8TER0 FO393414.2-201ENST00000405153 598 ntBASIC19.78■□□□□ 0.76
SNED1Q8TER0 RPL13P2-201ENST00000440687 659 ntBASIC19.78■□□□□ 0.76
SNED1Q8TER0 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC19.78■□□□□ 0.76
SNED1Q8TER0 FAM8A2P-201ENST00000528813 1142 ntBASIC19.78■□□□□ 0.76
SNED1Q8TER0 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SNED1Q8TER0 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SNED1Q8TER0 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.78■□□□□ 0.76
SNED1Q8TER0 DEK-201ENST00000244776 1441 ntTSL 2 BASIC19.78■□□□□ 0.76
SNED1Q8TER0 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNED1Q8TER0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SNED1Q8TER0 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC19.78■□□□□ 0.76
SNED1Q8TER0 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SNED1Q8TER0 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SNED1Q8TER0 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SNED1Q8TER0 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNED1Q8TER0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNED1Q8TER0 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SNED1Q8TER0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNED1Q8TER0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNED1Q8TER0 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC19.78■□□□□ 0.76
SNED1Q8TER0 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC19.78■□□□□ 0.76
SNED1Q8TER0 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SNED1Q8TER0 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.78■□□□□ 0.76
SNED1Q8TER0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SNED1Q8TER0 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNED1Q8TER0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNED1Q8TER0 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC19.77■□□□□ 0.76
SNED1Q8TER0 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNED1Q8TER0 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC19.77■□□□□ 0.76
SNED1Q8TER0 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
SNED1Q8TER0 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC19.77■□□□□ 0.76
SNED1Q8TER0 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
SNED1Q8TER0 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC19.77■□□□□ 0.76
SNED1Q8TER0 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC19.77■□□□□ 0.76
SNED1Q8TER0 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC19.77■□□□□ 0.76
SNED1Q8TER0 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC19.77■□□□□ 0.76
SNED1Q8TER0 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms