Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.62■□□□□ 0.41
LMO3Q8TAP4 PRYP6-201ENST00000514804 343 ntBASIC17.62■□□□□ 0.41
LMO3Q8TAP4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.62■□□□□ 0.41
LMO3Q8TAP4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LMO3Q8TAP4 AC243562.1-201ENST00000560672 389 ntBASIC17.62■□□□□ 0.41
LMO3Q8TAP4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LMO3Q8TAP4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LMO3Q8TAP4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LMO3Q8TAP4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LMO3Q8TAP4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LMO3Q8TAP4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LMO3Q8TAP4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
LMO3Q8TAP4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
LMO3Q8TAP4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LMO3Q8TAP4 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LMO3Q8TAP4 AC008677.1-201ENST00000519230 1561 ntBASIC17.62■□□□□ 0.41
LMO3Q8TAP4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
LMO3Q8TAP4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LMO3Q8TAP4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
LMO3Q8TAP4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LMO3Q8TAP4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LMO3Q8TAP4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LMO3Q8TAP4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.61■□□□□ 0.41
LMO3Q8TAP4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LMO3Q8TAP4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LMO3Q8TAP4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LMO3Q8TAP4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.61■□□□□ 0.41
LMO3Q8TAP4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.61■□□□□ 0.41
LMO3Q8TAP4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.61■□□□□ 0.41
LMO3Q8TAP4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LMO3Q8TAP4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LMO3Q8TAP4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.61■□□□□ 0.41
LMO3Q8TAP4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.61■□□□□ 0.41
LMO3Q8TAP4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LMO3Q8TAP4 LINC01225-203ENST00000563550 1244 ntBASIC17.61■□□□□ 0.41
LMO3Q8TAP4 AL135744.1-201ENST00000565098 629 ntBASIC17.61■□□□□ 0.41
LMO3Q8TAP4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.61■□□□□ 0.41
LMO3Q8TAP4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.61■□□□□ 0.41
LMO3Q8TAP4 PMS2P7-201ENST00000506558 1336 ntBASIC17.61■□□□□ 0.41
LMO3Q8TAP4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LMO3Q8TAP4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.61■□□□□ 0.41
LMO3Q8TAP4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.61■□□□□ 0.41
LMO3Q8TAP4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LMO3Q8TAP4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.61■□□□□ 0.41
LMO3Q8TAP4 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.6■□□□□ 0.41
LMO3Q8TAP4 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.6■□□□□ 0.41
LMO3Q8TAP4 LINC02447-202ENST00000501888 2146 ntBASIC17.6■□□□□ 0.41
LMO3Q8TAP4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LMO3Q8TAP4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.6■□□□□ 0.41
LMO3Q8TAP4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.6■□□□□ 0.41
LMO3Q8TAP4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LMO3Q8TAP4 AC008741.2-201ENST00000612792 3115 ntBASIC17.6■□□□□ 0.41
LMO3Q8TAP4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LMO3Q8TAP4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LMO3Q8TAP4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.6■□□□□ 0.41
LMO3Q8TAP4 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LMO3Q8TAP4 MIR648-201ENST00000385046 94 ntBASIC17.6■□□□□ 0.41
LMO3Q8TAP4 TFAMP1-201ENST00000412727 736 ntBASIC17.6■□□□□ 0.41
LMO3Q8TAP4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
LMO3Q8TAP4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.6■□□□□ 0.41
LMO3Q8TAP4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.6■□□□□ 0.41
LMO3Q8TAP4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.6■□□□□ 0.41
LMO3Q8TAP4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.6■□□□□ 0.41
LMO3Q8TAP4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.6■□□□□ 0.41
LMO3Q8TAP4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.6■□□□□ 0.41
LMO3Q8TAP4 C20orf181-201ENST00000623918 480 ntBASIC17.6■□□□□ 0.41
LMO3Q8TAP4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.6■□□□□ 0.41
LMO3Q8TAP4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LMO3Q8TAP4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LMO3Q8TAP4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LMO3Q8TAP4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LMO3Q8TAP4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LMO3Q8TAP4 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LMO3Q8TAP4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
LMO3Q8TAP4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LMO3Q8TAP4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LMO3Q8TAP4 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
LMO3Q8TAP4 AC008894.3-201ENST00000624324 3103 ntBASIC17.6■□□□□ 0.41
LMO3Q8TAP4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.6■□□□□ 0.41
LMO3Q8TAP4 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
LMO3Q8TAP4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LMO3Q8TAP4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
LMO3Q8TAP4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LMO3Q8TAP4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LMO3Q8TAP4 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
LMO3Q8TAP4 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.59■□□□□ 0.41
LMO3Q8TAP4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LMO3Q8TAP4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
LMO3Q8TAP4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
LMO3Q8TAP4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LMO3Q8TAP4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LMO3Q8TAP4 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LMO3Q8TAP4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
LMO3Q8TAP4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LMO3Q8TAP4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LMO3Q8TAP4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LMO3Q8TAP4 KRT8P48-201ENST00000515599 1220 ntBASIC17.59■□□□□ 0.41
LMO3Q8TAP4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.59■□□□□ 0.41
LMO3Q8TAP4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.59■□□□□ 0.41
LMO3Q8TAP4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms