Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AC108725.1-201ENST00000495472 409 ntBASIC25.37■■□□□ 1.65
CFAP43Q8NDM7 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC25.37■■□□□ 1.65
CFAP43Q8NDM7 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC25.37■■□□□ 1.65
CFAP43Q8NDM7 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC25.37■■□□□ 1.65
CFAP43Q8NDM7 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
CFAP43Q8NDM7 MIR8072-201ENST00000614241 80 ntBASIC25.37■■□□□ 1.65
CFAP43Q8NDM7 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC25.37■■□□□ 1.65
CFAP43Q8NDM7 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC25.37■■□□□ 1.65
CFAP43Q8NDM7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CFAP43Q8NDM7 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 STX1A-203ENST00000395155 783 ntTSL 2 BASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 MIR1247-201ENST00000408206 136 ntBASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 TPI1-206ENST00000488464 791 ntTSL 5 BASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 AL391069.4-201ENST00000609583 481 ntBASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 NSL1-201ENST00000366976 722 ntTSL 2 BASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 AC233724.13-201ENST00000598383 410 ntBASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 AL365330.1-201ENST00000607459 531 ntBASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CFAP43Q8NDM7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CFAP43Q8NDM7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC25.35■■□□□ 1.65
CFAP43Q8NDM7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC25.35■■□□□ 1.65
CFAP43Q8NDM7 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC25.35■■□□□ 1.65
CFAP43Q8NDM7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
CFAP43Q8NDM7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CFAP43Q8NDM7 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CFAP43Q8NDM7 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CFAP43Q8NDM7 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC25.35■■□□□ 1.65
CFAP43Q8NDM7 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC25.35■■□□□ 1.65
CFAP43Q8NDM7 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CFAP43Q8NDM7 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC25.35■■□□□ 1.65
CFAP43Q8NDM7 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
CFAP43Q8NDM7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CFAP43Q8NDM7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CFAP43Q8NDM7 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC25.35■■□□□ 1.65
CFAP43Q8NDM7 CLK3P2-201ENST00000427566 1453 ntBASIC25.35■■□□□ 1.65
CFAP43Q8NDM7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC25.35■■□□□ 1.65
CFAP43Q8NDM7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC25.35■■□□□ 1.65
CFAP43Q8NDM7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CFAP43Q8NDM7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CFAP43Q8NDM7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CFAP43Q8NDM7 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC25.34■■□□□ 1.65
CFAP43Q8NDM7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
CFAP43Q8NDM7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CFAP43Q8NDM7 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CFAP43Q8NDM7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CFAP43Q8NDM7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CFAP43Q8NDM7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC25.34■■□□□ 1.65
CFAP43Q8NDM7 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CFAP43Q8NDM7 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CFAP43Q8NDM7 SPDYE17-201ENST00000412399 783 ntBASIC25.34■■□□□ 1.65
CFAP43Q8NDM7 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC25.34■■□□□ 1.65
CFAP43Q8NDM7 KRT43P-201ENST00000434019 910 ntBASIC25.34■■□□□ 1.65
CFAP43Q8NDM7 CTBP2P5-201ENST00000454986 1264 ntBASIC25.34■■□□□ 1.65
CFAP43Q8NDM7 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CFAP43Q8NDM7 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC25.34■■□□□ 1.65
CFAP43Q8NDM7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
CFAP43Q8NDM7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CFAP43Q8NDM7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC25.34■■□□□ 1.65
CFAP43Q8NDM7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CFAP43Q8NDM7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC25.34■■□□□ 1.65
CFAP43Q8NDM7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
CFAP43Q8NDM7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CFAP43Q8NDM7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC25.34■■□□□ 1.65
CFAP43Q8NDM7 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CFAP43Q8NDM7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CFAP43Q8NDM7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
CFAP43Q8NDM7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CFAP43Q8NDM7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC25.33■■□□□ 1.65
CFAP43Q8NDM7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms