Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 HCG4-201ENST00000418983 998 ntBASIC17.01■□□□□ 0.31
PAF1Q8N7H5 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 AL031432.2-201ENST00000566714 459 ntBASIC17.01■□□□□ 0.31
PAF1Q8N7H5 AL928711.1-201ENST00000570165 459 ntBASIC17.01■□□□□ 0.31
PAF1Q8N7H5 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 REXO1L3P-201ENST00000622202 1288 ntBASIC17.01■□□□□ 0.31
PAF1Q8N7H5 AL645728.2-201ENST00000641974 660 ntBASIC17.01■□□□□ 0.31
PAF1Q8N7H5 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 PCDHB17P-201ENST00000539533 2393 ntBASIC17.01■□□□□ 0.31
PAF1Q8N7H5 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PAF1Q8N7H5 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17■□□□□ 0.31
PAF1Q8N7H5 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PAF1Q8N7H5 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PAF1Q8N7H5 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PAF1Q8N7H5 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17■□□□□ 0.31
PAF1Q8N7H5 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PAF1Q8N7H5 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
PAF1Q8N7H5 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17■□□□□ 0.31
PAF1Q8N7H5 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17■□□□□ 0.31
PAF1Q8N7H5 HNRNPA1P28-201ENST00000424481 961 ntBASIC17■□□□□ 0.31
PAF1Q8N7H5 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PAF1Q8N7H5 AC074386.1-202ENST00000463561 864 ntBASIC17■□□□□ 0.31
PAF1Q8N7H5 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PAF1Q8N7H5 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17■□□□□ 0.31
PAF1Q8N7H5 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17■□□□□ 0.31
PAF1Q8N7H5 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17■□□□□ 0.31
PAF1Q8N7H5 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
PAF1Q8N7H5 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PAF1Q8N7H5 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17■□□□□ 0.31
PAF1Q8N7H5 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17■□□□□ 0.31
PAF1Q8N7H5 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17■□□□□ 0.31
PAF1Q8N7H5 MED16-214ENST00000617672 554 ntTSL 5 BASIC17■□□□□ 0.31
PAF1Q8N7H5 AC092865.6-201ENST00000642101 219 ntBASIC17■□□□□ 0.31
PAF1Q8N7H5 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC17■□□□□ 0.31
PAF1Q8N7H5 AC080080.1-201ENST00000625121 2420 ntBASIC17■□□□□ 0.31
PAF1Q8N7H5 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PAF1Q8N7H5 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17■□□□□ 0.31
PAF1Q8N7H5 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
PAF1Q8N7H5 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC17■□□□□ 0.31
PAF1Q8N7H5 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PAF1Q8N7H5 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PAF1Q8N7H5 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17■□□□□ 0.31
PAF1Q8N7H5 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PAF1Q8N7H5 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PAF1Q8N7H5 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PAF1Q8N7H5 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PAF1Q8N7H5 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.99■□□□□ 0.31
PAF1Q8N7H5 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PAF1Q8N7H5 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PAF1Q8N7H5 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.99■□□□□ 0.31
PAF1Q8N7H5 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PAF1Q8N7H5 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PAF1Q8N7H5 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.99■□□□□ 0.31
PAF1Q8N7H5 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PAF1Q8N7H5 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PAF1Q8N7H5 AC009053.2-201ENST00000563701 2365 ntBASIC16.99■□□□□ 0.31
PAF1Q8N7H5 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PAF1Q8N7H5 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PAF1Q8N7H5 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
PAF1Q8N7H5 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PAF1Q8N7H5 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PAF1Q8N7H5 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PAF1Q8N7H5 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PAF1Q8N7H5 PDPK2P-202ENST00000562415 1191 ntBASIC16.99■□□□□ 0.31
PAF1Q8N7H5 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PAF1Q8N7H5 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.99■□□□□ 0.31
PAF1Q8N7H5 MIR4515-201ENST00000584082 81 ntBASIC16.99■□□□□ 0.31
PAF1Q8N7H5 MTDHP5-201ENST00000598980 586 ntBASIC16.99■□□□□ 0.31
PAF1Q8N7H5 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PAF1Q8N7H5 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PAF1Q8N7H5 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PAF1Q8N7H5 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.99■□□□□ 0.31
PAF1Q8N7H5 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.99■□□□□ 0.31
PAF1Q8N7H5 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
PAF1Q8N7H5 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PAF1Q8N7H5 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PAF1Q8N7H5 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PAF1Q8N7H5 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.99■□□□□ 0.31
PAF1Q8N7H5 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms