Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CRLF3Q8IUI8 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CRLF3Q8IUI8 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CRLF3Q8IUI8 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CRLF3Q8IUI8 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CRLF3Q8IUI8 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.58■□□□□ 0.24
CRLF3Q8IUI8 RCN1P2-201ENST00000398357 915 ntBASIC16.58■□□□□ 0.24
CRLF3Q8IUI8 SAPCD2P3-201ENST00000455031 850 ntBASIC16.58■□□□□ 0.24
CRLF3Q8IUI8 AC009078.2-202ENST00000463353 338 ntBASIC16.58■□□□□ 0.24
CRLF3Q8IUI8 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.58■□□□□ 0.24
CRLF3Q8IUI8 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.58■□□□□ 0.24
CRLF3Q8IUI8 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.58■□□□□ 0.24
CRLF3Q8IUI8 AC009533.2-201ENST00000543664 586 ntBASIC16.58■□□□□ 0.24
CRLF3Q8IUI8 AL160237.2-201ENST00000556165 472 ntBASIC16.58■□□□□ 0.24
CRLF3Q8IUI8 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CRLF3Q8IUI8 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CRLF3Q8IUI8 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.58■□□□□ 0.24
CRLF3Q8IUI8 AL121912.1-201ENST00000603683 238 ntBASIC16.58■□□□□ 0.24
CRLF3Q8IUI8 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.58■□□□□ 0.24
CRLF3Q8IUI8 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CRLF3Q8IUI8 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.58■□□□□ 0.24
CRLF3Q8IUI8 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CRLF3Q8IUI8 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.58■□□□□ 0.24
CRLF3Q8IUI8 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CRLF3Q8IUI8 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CRLF3Q8IUI8 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CRLF3Q8IUI8 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.58■□□□□ 0.24
CRLF3Q8IUI8 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CRLF3Q8IUI8 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CRLF3Q8IUI8 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.58■□□□□ 0.24
CRLF3Q8IUI8 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CRLF3Q8IUI8 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CRLF3Q8IUI8 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CRLF3Q8IUI8 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CRLF3Q8IUI8 AC126755.1-201ENST00000525846 6405 ntBASIC16.58■□□□□ 0.24
CRLF3Q8IUI8 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CRLF3Q8IUI8 AC126177.1-201ENST00000547829 2218 ntBASIC16.57■□□□□ 0.24
CRLF3Q8IUI8 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.57■□□□□ 0.24
CRLF3Q8IUI8 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CRLF3Q8IUI8 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.57■□□□□ 0.24
CRLF3Q8IUI8 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CRLF3Q8IUI8 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CRLF3Q8IUI8 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.57■□□□□ 0.24
CRLF3Q8IUI8 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.57■□□□□ 0.24
CRLF3Q8IUI8 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.57■□□□□ 0.24
CRLF3Q8IUI8 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.57■□□□□ 0.24
CRLF3Q8IUI8 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CRLF3Q8IUI8 KRT8P49-201ENST00000604166 1432 ntBASIC16.57■□□□□ 0.24
CRLF3Q8IUI8 AC002310.6-201ENST00000624451 1377 ntBASIC16.57■□□□□ 0.24
CRLF3Q8IUI8 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CRLF3Q8IUI8 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CRLF3Q8IUI8 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.57■□□□□ 0.24
CRLF3Q8IUI8 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
CRLF3Q8IUI8 ACTG1P4-201ENST00000425123 1122 ntBASIC16.57■□□□□ 0.24
CRLF3Q8IUI8 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CRLF3Q8IUI8 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.57■□□□□ 0.24
CRLF3Q8IUI8 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.57■□□□□ 0.24
CRLF3Q8IUI8 AC013467.2-201ENST00000605472 835 ntBASIC16.57■□□□□ 0.24
CRLF3Q8IUI8 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CRLF3Q8IUI8 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CRLF3Q8IUI8 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CRLF3Q8IUI8 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.57■□□□□ 0.24
CRLF3Q8IUI8 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CRLF3Q8IUI8 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CRLF3Q8IUI8 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CRLF3Q8IUI8 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CRLF3Q8IUI8 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CRLF3Q8IUI8 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CRLF3Q8IUI8 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CRLF3Q8IUI8 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.56■□□□□ 0.24
CRLF3Q8IUI8 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.56■□□□□ 0.24
CRLF3Q8IUI8 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CRLF3Q8IUI8 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CRLF3Q8IUI8 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CRLF3Q8IUI8 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CRLF3Q8IUI8 AC006277.1-201ENST00000624348 1610 ntBASIC16.56■□□□□ 0.24
CRLF3Q8IUI8 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CRLF3Q8IUI8 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CRLF3Q8IUI8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.56■□□□□ 0.24
CRLF3Q8IUI8 DBET-201ENST00000630918 3363 ntBASIC16.56■□□□□ 0.24
CRLF3Q8IUI8 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.56■□□□□ 0.24
CRLF3Q8IUI8 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.56■□□□□ 0.24
CRLF3Q8IUI8 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CRLF3Q8IUI8 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CRLF3Q8IUI8 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.56■□□□□ 0.24
CRLF3Q8IUI8 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CRLF3Q8IUI8 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CRLF3Q8IUI8 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CRLF3Q8IUI8 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CRLF3Q8IUI8 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CRLF3Q8IUI8 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CRLF3Q8IUI8 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CRLF3Q8IUI8 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CRLF3Q8IUI8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.56■□□□□ 0.24
CRLF3Q8IUI8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.56■□□□□ 0.24
CRLF3Q8IUI8 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.56■□□□□ 0.24
CRLF3Q8IUI8 AF238378.1-201ENST00000526806 358 ntBASIC16.56■□□□□ 0.24
CRLF3Q8IUI8 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.56■□□□□ 0.24
CRLF3Q8IUI8 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.56■□□□□ 0.24
CRLF3Q8IUI8 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms