Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 LINC00265-3P-201ENST00000447588 903 ntBASIC17.13■□□□□ 0.33
CCDC25Q86WR0 TSSC2-201ENST00000450217 709 ntBASIC17.13■□□□□ 0.33
CCDC25Q86WR0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 TPSP2-201ENST00000561760 610 ntBASIC17.13■□□□□ 0.33
CCDC25Q86WR0 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 AC114341.1-201ENST00000618070 349 ntBASIC17.13■□□□□ 0.33
CCDC25Q86WR0 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 AC005332.1-201ENST00000577698 1310 ntBASIC17.13■□□□□ 0.33
CCDC25Q86WR0 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 AL512652.2-201ENST00000625156 1716 ntBASIC17.13■□□□□ 0.33
CCDC25Q86WR0 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC25Q86WR0 SIGLEC16-201ENST00000599858 1437 ntBASIC17.13■□□□□ 0.33
CCDC25Q86WR0 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 AC074051.2-201ENST00000565115 352 ntBASIC17.12■□□□□ 0.33
CCDC25Q86WR0 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.12■□□□□ 0.33
CCDC25Q86WR0 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 AL031731.1-201ENST00000642131 2094 ntBASIC17.12■□□□□ 0.33
CCDC25Q86WR0 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 SNX33P1-201ENST00000592116 1762 ntBASIC17.12■□□□□ 0.33
CCDC25Q86WR0 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC25Q86WR0 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC25Q86WR0 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC25Q86WR0 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CCDC25Q86WR0 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC25Q86WR0 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC25Q86WR0 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC25Q86WR0 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC25Q86WR0 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC25Q86WR0 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC25Q86WR0 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC25Q86WR0 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC25Q86WR0 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC25Q86WR0 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CCDC25Q86WR0 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC25Q86WR0 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC25Q86WR0 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC25Q86WR0 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC25Q86WR0 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms