Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PACS2Q86VP3 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PACS2Q86VP3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
PACS2Q86VP3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PACS2Q86VP3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PACS2Q86VP3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PACS2Q86VP3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.71■□□□□ 0.27
PACS2Q86VP3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.71■□□□□ 0.27
PACS2Q86VP3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.71■□□□□ 0.27
PACS2Q86VP3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.71■□□□□ 0.27
PACS2Q86VP3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PACS2Q86VP3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PACS2Q86VP3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PACS2Q86VP3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.71■□□□□ 0.27
PACS2Q86VP3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PACS2Q86VP3 CICP23-201ENST00000605013 2741 ntBASIC16.71■□□□□ 0.27
PACS2Q86VP3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PACS2Q86VP3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PACS2Q86VP3 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PACS2Q86VP3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
PACS2Q86VP3 LINC00552-201ENST00000625151 2579 ntBASIC16.71■□□□□ 0.26
PACS2Q86VP3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PACS2Q86VP3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.7■□□□□ 0.26
PACS2Q86VP3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
PACS2Q86VP3 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PACS2Q86VP3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PACS2Q86VP3 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC16.7■□□□□ 0.26
PACS2Q86VP3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PACS2Q86VP3 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.7■□□□□ 0.26
PACS2Q86VP3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PACS2Q86VP3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PACS2Q86VP3 KRT89P-201ENST00000620027 1478 ntBASIC16.7■□□□□ 0.26
PACS2Q86VP3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PACS2Q86VP3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PACS2Q86VP3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PACS2Q86VP3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PACS2Q86VP3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.7■□□□□ 0.26
PACS2Q86VP3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PACS2Q86VP3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.7■□□□□ 0.26
PACS2Q86VP3 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PACS2Q86VP3 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PACS2Q86VP3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.7■□□□□ 0.26
PACS2Q86VP3 BX276092.5-203ENST00000456199 560 ntBASIC16.7■□□□□ 0.26
PACS2Q86VP3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.7■□□□□ 0.26
PACS2Q86VP3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.7■□□□□ 0.26
PACS2Q86VP3 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.7■□□□□ 0.26
PACS2Q86VP3 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PACS2Q86VP3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PACS2Q86VP3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PACS2Q86VP3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.7■□□□□ 0.26
PACS2Q86VP3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PACS2Q86VP3 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
PACS2Q86VP3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.7■□□□□ 0.26
PACS2Q86VP3 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
PACS2Q86VP3 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PACS2Q86VP3 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC16.7■□□□□ 0.26
PACS2Q86VP3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PACS2Q86VP3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
PACS2Q86VP3 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PACS2Q86VP3 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PACS2Q86VP3 AC132938.6-201ENST00000623828 1655 ntBASIC16.69■□□□□ 0.26
PACS2Q86VP3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PACS2Q86VP3 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PACS2Q86VP3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.69■□□□□ 0.26
PACS2Q86VP3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PACS2Q86VP3 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PACS2Q86VP3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PACS2Q86VP3 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.69■□□□□ 0.26
PACS2Q86VP3 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PACS2Q86VP3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.69■□□□□ 0.26
PACS2Q86VP3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PACS2Q86VP3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PACS2Q86VP3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PACS2Q86VP3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PACS2Q86VP3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.69■□□□□ 0.26
PACS2Q86VP3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.69■□□□□ 0.26
PACS2Q86VP3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.69■□□□□ 0.26
PACS2Q86VP3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.69■□□□□ 0.26
PACS2Q86VP3 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC16.69■□□□□ 0.26
PACS2Q86VP3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PACS2Q86VP3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.69■□□□□ 0.26
PACS2Q86VP3 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.69■□□□□ 0.26
PACS2Q86VP3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PACS2Q86VP3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.69■□□□□ 0.26
PACS2Q86VP3 RN7SL121P-201ENST00000584223 273 ntBASIC16.69■□□□□ 0.26
PACS2Q86VP3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PACS2Q86VP3 AL121672.3-201ENST00000608644 468 ntBASIC16.69■□□□□ 0.26
PACS2Q86VP3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PACS2Q86VP3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
PACS2Q86VP3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PACS2Q86VP3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PACS2Q86VP3 AC093525.9-201ENST00000624961 1746 ntBASIC16.69■□□□□ 0.26
PACS2Q86VP3 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PACS2Q86VP3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PACS2Q86VP3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
PACS2Q86VP3 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PACS2Q86VP3 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PACS2Q86VP3 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.69■□□□□ 0.26
PACS2Q86VP3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PACS2Q86VP3 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms