Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.6■□□□□ 0.25
LYSMD3Q7Z3D4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LYSMD3Q7Z3D4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.6■□□□□ 0.25
LYSMD3Q7Z3D4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LYSMD3Q7Z3D4 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LYSMD3Q7Z3D4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LYSMD3Q7Z3D4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.6■□□□□ 0.25
LYSMD3Q7Z3D4 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LYSMD3Q7Z3D4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LYSMD3Q7Z3D4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LYSMD3Q7Z3D4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
LYSMD3Q7Z3D4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LYSMD3Q7Z3D4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LYSMD3Q7Z3D4 AC092183.1-201ENST00000469884 875 ntBASIC16.6■□□□□ 0.25
LYSMD3Q7Z3D4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.6■□□□□ 0.25
LYSMD3Q7Z3D4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.6■□□□□ 0.25
LYSMD3Q7Z3D4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
LYSMD3Q7Z3D4 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LYSMD3Q7Z3D4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
LYSMD3Q7Z3D4 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LYSMD3Q7Z3D4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.6■□□□□ 0.25
LYSMD3Q7Z3D4 AC055717.3-201ENST00000622967 595 ntBASIC16.6■□□□□ 0.25
LYSMD3Q7Z3D4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.6■□□□□ 0.25
LYSMD3Q7Z3D4 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LYSMD3Q7Z3D4 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LYSMD3Q7Z3D4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LYSMD3Q7Z3D4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LYSMD3Q7Z3D4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
LYSMD3Q7Z3D4 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LYSMD3Q7Z3D4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.6■□□□□ 0.25
LYSMD3Q7Z3D4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LYSMD3Q7Z3D4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LYSMD3Q7Z3D4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LYSMD3Q7Z3D4 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LYSMD3Q7Z3D4 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
LYSMD3Q7Z3D4 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 ADH5P3-201ENST00000433842 1137 ntBASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 RARRES2P8-201ENST00000566335 367 ntBASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 MIR4469-201ENST00000583919 79 ntBASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 AL691403.2-201ENST00000618460 490 ntBASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 WASH6P-202ENST00000359512 1437 ntBASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 PCGF3-213ENST00000620529 1899 ntBASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD3Q7Z3D4 ELL2P1-201ENST00000413990 1906 ntBASIC16.58■□□□□ 0.25
LYSMD3Q7Z3D4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.58■□□□□ 0.25
LYSMD3Q7Z3D4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.58■□□□□ 0.25
LYSMD3Q7Z3D4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LYSMD3Q7Z3D4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.58■□□□□ 0.25
LYSMD3Q7Z3D4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LYSMD3Q7Z3D4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LYSMD3Q7Z3D4 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.58■□□□□ 0.25
LYSMD3Q7Z3D4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.58■□□□□ 0.25
LYSMD3Q7Z3D4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
LYSMD3Q7Z3D4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
LYSMD3Q7Z3D4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms