Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 AL139384.1-201ENST00000612143 3047 ntBASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 AC254562.1-201ENST00000417586 456 ntBASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 AC092474.2-201ENST00000424288 719 ntBASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 AC055717.3-201ENST00000622967 595 ntBASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 LINC02199-201ENST00000506655 2702 ntBASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC39BQ5VTQ0 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TTC39BQ5VTQ0 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TTC39BQ5VTQ0 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TTC39BQ5VTQ0 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.21■□□□□ 0.34
TTC39BQ5VTQ0 AKAP8P1-201ENST00000434743 1349 ntBASIC17.21■□□□□ 0.34
TTC39BQ5VTQ0 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.21■□□□□ 0.34
TTC39BQ5VTQ0 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 CICP6-201ENST00000457191 2729 ntBASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 HLA-A-202ENST00000376806 1854 ntBASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 AL662844.4-201ENST00000606367 2838 ntBASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 ADH5P3-201ENST00000433842 1137 ntBASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 AP000344.2-201ENST00000512987 629 ntBASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 RARRES2P8-201ENST00000566335 367 ntBASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 AL391256.1-201ENST00000443260 1855 ntBASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.2■□□□□ 0.34
TTC39BQ5VTQ0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms