Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHRFAM7AQ494W8 AC026691.1-201ENST00000602502 2017 ntBASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 AC106028.4-201ENST00000614509 607 ntBASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.54□□□□□ -0.08
CHRFAM7AQ494W8 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 PCDHA1-201ENST00000378133 2726 ntBASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 CYP2T1P-202ENST00000641596 2535 ntBASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 BX005266.1-201ENST00000473402 457 ntBASIC14.53□□□□□ -0.08
CHRFAM7AQ494W8 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms