Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDR2Q01850 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.63■□□□□ 0.41
CDR2Q01850 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.63■□□□□ 0.41
CDR2Q01850 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDR2Q01850 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDR2Q01850 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CDR2Q01850 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.63■□□□□ 0.41
CDR2Q01850 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.63■□□□□ 0.41
CDR2Q01850 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CDR2Q01850 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDR2Q01850 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDR2Q01850 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.63■□□□□ 0.41
CDR2Q01850 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.63■□□□□ 0.41
CDR2Q01850 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
CDR2Q01850 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDR2Q01850 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.63■□□□□ 0.41
CDR2Q01850 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDR2Q01850 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.62■□□□□ 0.41
CDR2Q01850 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDR2Q01850 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDR2Q01850 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDR2Q01850 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDR2Q01850 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CDR2Q01850 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDR2Q01850 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDR2Q01850 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDR2Q01850 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
CDR2Q01850 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.62■□□□□ 0.41
CDR2Q01850 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDR2Q01850 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDR2Q01850 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDR2Q01850 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDR2Q01850 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CDR2Q01850 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.62■□□□□ 0.41
CDR2Q01850 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.62■□□□□ 0.41
CDR2Q01850 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CDR2Q01850 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.62■□□□□ 0.41
CDR2Q01850 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.62■□□□□ 0.41
CDR2Q01850 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDR2Q01850 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.62■□□□□ 0.41
CDR2Q01850 AC034105.1-201ENST00000563488 319 ntBASIC17.62■□□□□ 0.41
CDR2Q01850 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CDR2Q01850 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDR2Q01850 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CDR2Q01850 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDR2Q01850 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDR2Q01850 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDR2Q01850 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDR2Q01850 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDR2Q01850 REXO1L8P-201ENST00000604378 1897 ntBASIC17.62■□□□□ 0.41
CDR2Q01850 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDR2Q01850 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDR2Q01850 AC104109.2-201ENST00000602919 1418 ntBASIC17.62■□□□□ 0.41
CDR2Q01850 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CDR2Q01850 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDR2Q01850 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDR2Q01850 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDR2Q01850 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDR2Q01850 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDR2Q01850 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDR2Q01850 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDR2Q01850 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.61■□□□□ 0.41
CDR2Q01850 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
CDR2Q01850 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDR2Q01850 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CDR2Q01850 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDR2Q01850 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.61■□□□□ 0.41
CDR2Q01850 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.61■□□□□ 0.41
CDR2Q01850 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDR2Q01850 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDR2Q01850 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDR2Q01850 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CDR2Q01850 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CDR2Q01850 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDR2Q01850 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CDR2Q01850 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDR2Q01850 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDR2Q01850 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
CDR2Q01850 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.61■□□□□ 0.41
CDR2Q01850 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.61■□□□□ 0.41
CDR2Q01850 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.61■□□□□ 0.41
CDR2Q01850 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.61■□□□□ 0.41
CDR2Q01850 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.61■□□□□ 0.41
CDR2Q01850 AC023141.13-201ENST00000604991 943 ntBASIC17.61■□□□□ 0.41
CDR2Q01850 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CDR2Q01850 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.61■□□□□ 0.41
CDR2Q01850 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
CDR2Q01850 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDR2Q01850 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDR2Q01850 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDR2Q01850 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDR2Q01850 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.61■□□□□ 0.41
CDR2Q01850 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDR2Q01850 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDR2Q01850 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.61■□□□□ 0.41
CDR2Q01850 LINC02199-201ENST00000506655 2702 ntBASIC17.61■□□□□ 0.41
CDR2Q01850 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDR2Q01850 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.61■□□□□ 0.41
CDR2Q01850 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDR2Q01850 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms