Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VBP1P61758 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.86□□□□□ -0.03
VBP1P61758 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC14.86□□□□□ -0.03
VBP1P61758 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.86□□□□□ -0.03
VBP1P61758 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.86□□□□□ -0.03
VBP1P61758 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC14.86□□□□□ -0.03
VBP1P61758 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.86□□□□□ -0.03
VBP1P61758 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VBP1P61758 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VBP1P61758 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.86□□□□□ -0.03
VBP1P61758 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VBP1P61758 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VBP1P61758 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.86□□□□□ -0.03
VBP1P61758 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VBP1P61758 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
VBP1P61758 TMBIM7P-203ENST00000641617 1718 ntBASIC14.86□□□□□ -0.03
VBP1P61758 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.86□□□□□ -0.03
VBP1P61758 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
VBP1P61758 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VBP1P61758 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
VBP1P61758 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VBP1P61758 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VBP1P61758 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
VBP1P61758 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
VBP1P61758 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VBP1P61758 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VBP1P61758 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VBP1P61758 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VBP1P61758 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.85□□□□□ -0.03
VBP1P61758 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.85□□□□□ -0.03
VBP1P61758 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
VBP1P61758 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VBP1P61758 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
VBP1P61758 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VBP1P61758 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.85□□□□□ -0.03
VBP1P61758 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
VBP1P61758 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
VBP1P61758 RPS2P55-201ENST00000397318 883 ntBASIC14.85□□□□□ -0.03
VBP1P61758 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.85□□□□□ -0.03
VBP1P61758 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.85□□□□□ -0.03
VBP1P61758 APTR-205ENST00000447009 902 ntTSL 2 BASIC14.85□□□□□ -0.03
VBP1P61758 AC128676.1-201ENST00000454392 318 ntBASIC14.85□□□□□ -0.03
VBP1P61758 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VBP1P61758 STK19B-204ENST00000512515 211 ntBASIC14.85□□□□□ -0.03
VBP1P61758 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VBP1P61758 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.85□□□□□ -0.03
VBP1P61758 AC073912.3-201ENST00000624414 853 ntBASIC14.85□□□□□ -0.03
VBP1P61758 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VBP1P61758 AL391807.1-203ENST00000604392 2365 ntBASIC14.85□□□□□ -0.03
VBP1P61758 LINC00528-201ENST00000600723 2160 ntBASIC14.85□□□□□ -0.03
VBP1P61758 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VBP1P61758 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VBP1P61758 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VBP1P61758 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VBP1P61758 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VBP1P61758 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VBP1P61758 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.85□□□□□ -0.03
VBP1P61758 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.85□□□□□ -0.03
VBP1P61758 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.85□□□□□ -0.03
VBP1P61758 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VBP1P61758 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
VBP1P61758 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.85□□□□□ -0.03
VBP1P61758 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VBP1P61758 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.85□□□□□ -0.03
VBP1P61758 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
VBP1P61758 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
VBP1P61758 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VBP1P61758 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VBP1P61758 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.84□□□□□ -0.03
VBP1P61758 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.84□□□□□ -0.03
VBP1P61758 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.84□□□□□ -0.03
VBP1P61758 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.84□□□□□ -0.03
VBP1P61758 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VBP1P61758 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VBP1P61758 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VBP1P61758 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
VBP1P61758 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.84□□□□□ -0.03
VBP1P61758 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VBP1P61758 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.84□□□□□ -0.03
VBP1P61758 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.84□□□□□ -0.03
VBP1P61758 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VBP1P61758 CICP23-201ENST00000605013 2741 ntBASIC14.84□□□□□ -0.03
VBP1P61758 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.84□□□□□ -0.03
VBP1P61758 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.84□□□□□ -0.03
VBP1P61758 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.84□□□□□ -0.03
VBP1P61758 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VBP1P61758 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VBP1P61758 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VBP1P61758 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.84□□□□□ -0.03
VBP1P61758 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC14.84□□□□□ -0.03
VBP1P61758 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.84□□□□□ -0.03
VBP1P61758 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.84□□□□□ -0.03
VBP1P61758 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.84□□□□□ -0.03
VBP1P61758 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC14.84□□□□□ -0.03
VBP1P61758 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.84□□□□□ -0.03
VBP1P61758 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.84□□□□□ -0.03
VBP1P61758 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.84□□□□□ -0.03
VBP1P61758 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.84□□□□□ -0.03
VBP1P61758 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC14.84□□□□□ -0.03
VBP1P61758 AC013467.2-201ENST00000605472 835 ntBASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms