Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC9A3P48764 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC9A3P48764 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC9A3P48764 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC9A3P48764 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
SLC9A3P48764 UPK3BP1-201ENST00000428678 509 ntBASIC15.22■□□□□ 0.03
SLC9A3P48764 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC9A3P48764 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC9A3P48764 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC9A3P48764 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC9A3P48764 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC9A3P48764 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC9A3P48764 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC9A3P48764 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC9A3P48764 AC008608.2-201ENST00000606089 416 ntBASIC15.22■□□□□ 0.03
SLC9A3P48764 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC9A3P48764 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC9A3P48764 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC9A3P48764 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SLC9A3P48764 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC9A3P48764 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC9A3P48764 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC9A3P48764 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC9A3P48764 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC9A3P48764 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SLC9A3P48764 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SLC9A3P48764 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC9A3P48764 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC9A3P48764 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC9A3P48764 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC9A3P48764 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC9A3P48764 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC9A3P48764 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.21■□□□□ 0.03
SLC9A3P48764 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC9A3P48764 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC9A3P48764 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC9A3P48764 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SLC9A3P48764 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC9A3P48764 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC9A3P48764 MTHFR-217ENST00000641820 1569 ntBASIC15.21■□□□□ 0.03
SLC9A3P48764 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC9A3P48764 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
SLC9A3P48764 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SLC9A3P48764 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC9A3P48764 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC9A3P48764 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC9A3P48764 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC9A3P48764 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC9A3P48764 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC9A3P48764 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC9A3P48764 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC9A3P48764 MIR1224-201ENST00000408193 85 ntBASIC15.21■□□□□ 0.03
SLC9A3P48764 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC9A3P48764 FGFR3P6-201ENST00000457012 610 ntBASIC15.21■□□□□ 0.03
SLC9A3P48764 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
SLC9A3P48764 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC9A3P48764 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC9A3P48764 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.21■□□□□ 0.03
SLC9A3P48764 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.21■□□□□ 0.03
SLC9A3P48764 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.21■□□□□ 0.03
SLC9A3P48764 MTDHP4-201ENST00000600287 670 ntBASIC15.21■□□□□ 0.03
SLC9A3P48764 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC9A3P48764 AC068587.6-202ENST00000641839 5619 ntBASIC15.21■□□□□ 0.03
SLC9A3P48764 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC9A3P48764 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SLC9A3P48764 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC9A3P48764 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.21■□□□□ 0.02
SLC9A3P48764 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
SLC9A3P48764 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SLC9A3P48764 AC092384.3-202ENST00000564646 2873 ntBASIC15.21■□□□□ 0.02
SLC9A3P48764 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.21■□□□□ 0.02
SLC9A3P48764 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SLC9A3P48764 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SLC9A3P48764 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC9A3P48764 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC9A3P48764 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC9A3P48764 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC9A3P48764 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SLC9A3P48764 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC9A3P48764 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC9A3P48764 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.2■□□□□ 0.02
SLC9A3P48764 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC9A3P48764 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
SLC9A3P48764 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.2■□□□□ 0.02
SLC9A3P48764 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC9A3P48764 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC9A3P48764 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC9A3P48764 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC9A3P48764 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC9A3P48764 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC9A3P48764 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC9A3P48764 TSPY19P-201ENST00000418461 509 ntBASIC15.2■□□□□ 0.02
SLC9A3P48764 TSPY18P-201ENST00000441642 509 ntBASIC15.2■□□□□ 0.02
SLC9A3P48764 HCG4P8-203ENST00000443049 980 ntBASIC15.2■□□□□ 0.02
SLC9A3P48764 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC9A3P48764 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC9A3P48764 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.2■□□□□ 0.02
SLC9A3P48764 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.2■□□□□ 0.02
SLC9A3P48764 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC9A3P48764 AC091167.2-201ENST00000579581 588 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms