Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA4P43681 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA4P43681 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CHRNA4P43681 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.66■□□□□ 0.26
CHRNA4P43681 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA4P43681 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA4P43681 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA4P43681 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA4P43681 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA4P43681 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
CHRNA4P43681 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA4P43681 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.66■□□□□ 0.26
CHRNA4P43681 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA4P43681 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA4P43681 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA4P43681 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.66■□□□□ 0.26
CHRNA4P43681 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.66■□□□□ 0.26
CHRNA4P43681 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA4P43681 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.66■□□□□ 0.26
CHRNA4P43681 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.66■□□□□ 0.26
CHRNA4P43681 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA4P43681 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA4P43681 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA4P43681 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.66■□□□□ 0.26
CHRNA4P43681 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA4P43681 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.66■□□□□ 0.26
CHRNA4P43681 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA4P43681 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CHRNA4P43681 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CHRNA4P43681 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA4P43681 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.66■□□□□ 0.26
CHRNA4P43681 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.66■□□□□ 0.26
CHRNA4P43681 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRNA4P43681 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRNA4P43681 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA4P43681 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
CHRNA4P43681 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CHRNA4P43681 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.65■□□□□ 0.26
CHRNA4P43681 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CHRNA4P43681 AC026691.1-201ENST00000602502 2017 ntBASIC16.65■□□□□ 0.26
CHRNA4P43681 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA4P43681 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA4P43681 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA4P43681 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA4P43681 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA4P43681 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRNA4P43681 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.65■□□□□ 0.26
CHRNA4P43681 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.65■□□□□ 0.26
CHRNA4P43681 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.65■□□□□ 0.26
CHRNA4P43681 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA4P43681 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA4P43681 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA4P43681 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRNA4P43681 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.65■□□□□ 0.26
CHRNA4P43681 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.65■□□□□ 0.26
CHRNA4P43681 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.65■□□□□ 0.26
CHRNA4P43681 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRNA4P43681 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.65■□□□□ 0.26
CHRNA4P43681 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA4P43681 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.65■□□□□ 0.26
CHRNA4P43681 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.65■□□□□ 0.26
CHRNA4P43681 AC099522.2-201ENST00000607001 744 ntBASIC16.65■□□□□ 0.26
CHRNA4P43681 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA4P43681 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA4P43681 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRNA4P43681 PCDHA1-201ENST00000378133 2726 ntBASIC16.65■□□□□ 0.26
CHRNA4P43681 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRNA4P43681 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CHRNA4P43681 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRNA4P43681 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA4P43681 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA4P43681 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA4P43681 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRNA4P43681 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
CHRNA4P43681 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
CHRNA4P43681 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
CHRNA4P43681 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.64■□□□□ 0.25
CHRNA4P43681 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA4P43681 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA4P43681 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA4P43681 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CHRNA4P43681 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
CHRNA4P43681 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA4P43681 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA4P43681 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.64■□□□□ 0.25
CHRNA4P43681 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CHRNA4P43681 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA4P43681 AC040169.1-201ENST00000565382 521 ntBASIC16.64■□□□□ 0.25
CHRNA4P43681 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.64■□□□□ 0.25
CHRNA4P43681 AL078644.1-201ENST00000609881 752 ntBASIC16.64■□□□□ 0.25
CHRNA4P43681 AC091812.2-201ENST00000619081 385 ntBASIC16.64■□□□□ 0.25
CHRNA4P43681 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.64■□□□□ 0.25
CHRNA4P43681 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CHRNA4P43681 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.64■□□□□ 0.25
CHRNA4P43681 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA4P43681 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA4P43681 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA4P43681 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.64■□□□□ 0.25
CHRNA4P43681 AC005622.1-201ENST00000636801 1703 ntBASIC16.64■□□□□ 0.25
CHRNA4P43681 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms