Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.48■□□□□ 0.23
HTR1BP28222 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.48■□□□□ 0.23
HTR1BP28222 AC093520.2-201ENST00000561830 333 ntBASIC16.48■□□□□ 0.23
HTR1BP28222 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.48■□□□□ 0.23
HTR1BP28222 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
HTR1BP28222 AC008267.7-201ENST00000624570 1194 ntBASIC16.48■□□□□ 0.23
HTR1BP28222 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.48■□□□□ 0.23
HTR1BP28222 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.48■□□□□ 0.23
HTR1BP28222 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HTR1BP28222 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
HTR1BP28222 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HTR1BP28222 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HTR1BP28222 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HTR1BP28222 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HTR1BP28222 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HTR1BP28222 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HTR1BP28222 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.48■□□□□ 0.23
HTR1BP28222 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HTR1BP28222 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.48■□□□□ 0.23
HTR1BP28222 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.48■□□□□ 0.23
HTR1BP28222 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.47■□□□□ 0.23
HTR1BP28222 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HTR1BP28222 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.47■□□□□ 0.23
HTR1BP28222 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.47■□□□□ 0.23
HTR1BP28222 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HTR1BP28222 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.47■□□□□ 0.23
HTR1BP28222 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.47■□□□□ 0.23
HTR1BP28222 AC016027.1-202ENST00000607927 1699 ntBASIC16.47■□□□□ 0.23
HTR1BP28222 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HTR1BP28222 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
HTR1BP28222 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HTR1BP28222 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.47■□□□□ 0.23
HTR1BP28222 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.47■□□□□ 0.23
HTR1BP28222 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.47■□□□□ 0.23
HTR1BP28222 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.47■□□□□ 0.23
HTR1BP28222 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HTR1BP28222 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.47■□□□□ 0.23
HTR1BP28222 KRT18P34-201ENST00000488218 1270 ntBASIC16.47■□□□□ 0.23
HTR1BP28222 AC067863.1-201ENST00000494933 530 ntBASIC16.47■□□□□ 0.23
HTR1BP28222 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.47■□□□□ 0.23
HTR1BP28222 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.47■□□□□ 0.23
HTR1BP28222 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.47■□□□□ 0.23
HTR1BP28222 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.47■□□□□ 0.23
HTR1BP28222 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
HTR1BP28222 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HTR1BP28222 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.47■□□□□ 0.23
HTR1BP28222 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HTR1BP28222 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
HTR1BP28222 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HTR1BP28222 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.47■□□□□ 0.23
HTR1BP28222 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.47■□□□□ 0.23
HTR1BP28222 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HTR1BP28222 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HTR1BP28222 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HTR1BP28222 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HTR1BP28222 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HTR1BP28222 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.46■□□□□ 0.23
HTR1BP28222 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HTR1BP28222 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
HTR1BP28222 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.46■□□□□ 0.23
HTR1BP28222 AC006277.1-201ENST00000624348 1610 ntBASIC16.46■□□□□ 0.23
HTR1BP28222 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HTR1BP28222 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HTR1BP28222 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.46■□□□□ 0.23
HTR1BP28222 CNN2P2-201ENST00000443536 909 ntBASIC16.46■□□□□ 0.23
HTR1BP28222 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HTR1BP28222 CNN2P3-201ENST00000450201 906 ntBASIC16.46■□□□□ 0.23
HTR1BP28222 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.46■□□□□ 0.23
HTR1BP28222 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
HTR1BP28222 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.46■□□□□ 0.23
HTR1BP28222 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.46■□□□□ 0.23
HTR1BP28222 AC109322.1-201ENST00000524499 1264 ntBASIC16.46■□□□□ 0.23
HTR1BP28222 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.46■□□□□ 0.23
HTR1BP28222 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HTR1BP28222 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
HTR1BP28222 AC013467.2-201ENST00000605472 835 ntBASIC16.46■□□□□ 0.23
HTR1BP28222 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HTR1BP28222 AL136317.3-201ENST00000618497 906 ntBASIC16.46■□□□□ 0.23
HTR1BP28222 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
HTR1BP28222 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
HTR1BP28222 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HTR1BP28222 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
HTR1BP28222 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HTR1BP28222 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HTR1BP28222 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HTR1BP28222 AC092068.3-201ENST00000587894 2016 ntBASIC16.46■□□□□ 0.23
HTR1BP28222 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HTR1BP28222 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.46■□□□□ 0.23
HTR1BP28222 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HTR1BP28222 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HTR1BP28222 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HTR1BP28222 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HTR1BP28222 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.46■□□□□ 0.22
HTR1BP28222 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
HTR1BP28222 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.46■□□□□ 0.22
HTR1BP28222 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.46■□□□□ 0.22
HTR1BP28222 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.45■□□□□ 0.22
HTR1BP28222 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HTR1BP28222 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HTR1BP28222 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms