Protein–RNA interactions for Protein: P24863

CCNC, Cyclin-C, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNCP24863 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCNCP24863 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCNCP24863 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCNCP24863 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCNCP24863 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.8■□□□□ 0.28
CCNCP24863 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCNCP24863 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCNCP24863 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCNCP24863 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCNCP24863 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCNCP24863 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCNCP24863 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.8■□□□□ 0.28
CCNCP24863 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCNCP24863 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.8■□□□□ 0.28
CCNCP24863 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CCNCP24863 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCNCP24863 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCNCP24863 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.8■□□□□ 0.28
CCNCP24863 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCNCP24863 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.79■□□□□ 0.28
CCNCP24863 DOC2GP-204ENST00000639052 2548 ntBASIC16.79■□□□□ 0.28
CCNCP24863 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.79■□□□□ 0.28
CCNCP24863 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCNCP24863 AC073439.1-201ENST00000624121 1774 ntBASIC16.79■□□□□ 0.28
CCNCP24863 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CCNCP24863 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCNCP24863 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCNCP24863 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCNCP24863 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.79■□□□□ 0.28
CCNCP24863 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
CCNCP24863 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCNCP24863 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCNCP24863 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.79■□□□□ 0.28
CCNCP24863 AL355306.1-201ENST00000415580 579 ntBASIC16.79■□□□□ 0.28
CCNCP24863 MKNK2P1-201ENST00000437526 628 ntBASIC16.79■□□□□ 0.28
CCNCP24863 ACTG1P14-201ENST00000446382 1122 ntBASIC16.79■□□□□ 0.28
CCNCP24863 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.79■□□□□ 0.28
CCNCP24863 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.79■□□□□ 0.28
CCNCP24863 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.79■□□□□ 0.28
CCNCP24863 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CCNCP24863 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.79■□□□□ 0.28
CCNCP24863 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCNCP24863 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.79■□□□□ 0.28
CCNCP24863 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCNCP24863 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CCNCP24863 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCNCP24863 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCNCP24863 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCNCP24863 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.79■□□□□ 0.28
CCNCP24863 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCNCP24863 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCNCP24863 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCNCP24863 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCNCP24863 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCNCP24863 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCNCP24863 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCNCP24863 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
CCNCP24863 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCNCP24863 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCNCP24863 AL596087.1-201ENST00000400979 1969 ntBASIC16.78■□□□□ 0.28
CCNCP24863 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNCP24863 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNCP24863 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNCP24863 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNCP24863 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNCP24863 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.78■□□□□ 0.28
CCNCP24863 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CCNCP24863 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.78■□□□□ 0.28
CCNCP24863 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNCP24863 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.78■□□□□ 0.28
CCNCP24863 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNCP24863 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.78■□□□□ 0.28
CCNCP24863 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNCP24863 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CCNCP24863 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCNCP24863 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNCP24863 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.78■□□□□ 0.28
CCNCP24863 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.78■□□□□ 0.28
CCNCP24863 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNCP24863 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.78■□□□□ 0.28
CCNCP24863 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CCNCP24863 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.78■□□□□ 0.28
CCNCP24863 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNCP24863 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNCP24863 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNCP24863 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNCP24863 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNCP24863 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCNCP24863 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CCNCP24863 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCNCP24863 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNCP24863 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.78■□□□□ 0.28
CCNCP24863 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.78■□□□□ 0.28
CCNCP24863 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.78■□□□□ 0.28
CCNCP24863 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCNCP24863 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCNCP24863 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCNCP24863 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCNCP24863 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CCNCP24863 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms