Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.2□□□□□ -0.14
CCL1P22362 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCL1P22362 AC008677.1-201ENST00000519230 1561 ntBASIC14.2□□□□□ -0.14
CCL1P22362 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.2□□□□□ -0.14
CCL1P22362 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL1P22362 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCL1P22362 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL1P22362 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCL1P22362 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL1P22362 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL1P22362 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL1P22362 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
CCL1P22362 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL1P22362 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL1P22362 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.19□□□□□ -0.14
CCL1P22362 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCL1P22362 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL1P22362 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.19□□□□□ -0.14
CCL1P22362 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.19□□□□□ -0.14
CCL1P22362 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.19□□□□□ -0.14
CCL1P22362 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CCL1P22362 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
CCL1P22362 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CCL1P22362 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL1P22362 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.19□□□□□ -0.14
CCL1P22362 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL1P22362 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.19□□□□□ -0.14
CCL1P22362 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CCL1P22362 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.19□□□□□ -0.14
CCL1P22362 AL031284.1-201ENST00000419297 478 ntBASIC14.19□□□□□ -0.14
CCL1P22362 AC098831.1-202ENST00000438821 336 ntBASIC14.19□□□□□ -0.14
CCL1P22362 AC009947.1-201ENST00000444350 727 ntBASIC14.19□□□□□ -0.14
CCL1P22362 AC093724.1-201ENST00000448659 1027 ntBASIC14.19□□□□□ -0.14
CCL1P22362 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCL1P22362 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.19□□□□□ -0.14
CCL1P22362 AP002469.2-201ENST00000531724 424 ntBASIC14.19□□□□□ -0.14
CCL1P22362 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.19□□□□□ -0.14
CCL1P22362 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.19□□□□□ -0.14
CCL1P22362 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.19□□□□□ -0.14
CCL1P22362 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CCL1P22362 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.19□□□□□ -0.14
CCL1P22362 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.19□□□□□ -0.14
CCL1P22362 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL1P22362 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL1P22362 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCL1P22362 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
CCL1P22362 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL1P22362 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL1P22362 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
CCL1P22362 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CCL1P22362 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCL1P22362 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL1P22362 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.19□□□□□ -0.14
CCL1P22362 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL1P22362 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL1P22362 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CCL1P22362 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL1P22362 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CCL1P22362 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
CCL1P22362 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCL1P22362 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CCL1P22362 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCL1P22362 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCL1P22362 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CCL1P22362 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL1P22362 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL1P22362 AC132872.4-202ENST00000622924 2756 ntBASIC14.18□□□□□ -0.14
CCL1P22362 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL1P22362 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.18□□□□□ -0.14
CCL1P22362 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
CCL1P22362 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.18□□□□□ -0.14
CCL1P22362 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL1P22362 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CCL1P22362 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL1P22362 PAUPAR-201ENST00000630360 2965 ntBASIC14.18□□□□□ -0.14
CCL1P22362 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.18□□□□□ -0.14
CCL1P22362 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CCL1P22362 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.18□□□□□ -0.14
CCL1P22362 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
CCL1P22362 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL1P22362 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL1P22362 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCL1P22362 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.18□□□□□ -0.14
CCL1P22362 AC004870.1-201ENST00000315132 882 ntBASIC14.18□□□□□ -0.14
CCL1P22362 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CCL1P22362 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.18□□□□□ -0.14
CCL1P22362 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL1P22362 RHOQP3-201ENST00000437982 621 ntBASIC14.18□□□□□ -0.14
CCL1P22362 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CCL1P22362 HCG4B-203ENST00000450128 991 ntBASIC14.18□□□□□ -0.14
CCL1P22362 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.18□□□□□ -0.14
CCL1P22362 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.18□□□□□ -0.14
CCL1P22362 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.18□□□□□ -0.14
CCL1P22362 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CCL1P22362 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.18□□□□□ -0.14
CCL1P22362 RN7SL510P-201ENST00000581311 263 ntBASIC14.18□□□□□ -0.14
CCL1P22362 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.18□□□□□ -0.14
CCL1P22362 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCL1P22362 AL049840.3-201ENST00000602669 611 ntBASIC14.18□□□□□ -0.14
CCL1P22362 AC104692.2-201ENST00000603054 253 ntBASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms